Expression: Amino acid biosynthesis in C. sinensis cv. Newhall on different rootstock

Overview


Analysis Name	Expression: Amino acid biosynthesis in C. sinensis cv. Newhall on different rootstock
Method	Illumina HiSeq 6000 (StringTie)
Source	PRJNA946264
Date performed	2023-09-19

This data is from the following manuscript: Xiong B, Li Q, Yao J, Zheng W, Ou Y, He Y, Liao L, Wang X, Deng H, Zhang M, Sun G, He S, He J, Zhang X, Wang Z. Transcriptome and UPLC-MS/MS reveal mechanisms of amino acid biosynthesis in sweet orange 'Newhall' after different rootstocks grafting. Frontiers in plant science. 2023; 14:1216826. NCBI BioProject PRJNA946264. Expression values are in FPKM. CT = C. sinensis cv. Newhall grafted onto P. trifoliata rootstock. CJ = C. sinensis cv. Newhall grafted onto C. junos Siebold ex Tanaka rootstock.

Sample	Tissue	Devolopmental stage
CT1-1_fpkm	Peel	Young fruit period, June
CT1-2_fpkm	Peel	Young fruit period, June
CT1-3_fpkm	Peel	Young fruit period, June
CJ1-1_fpkm	Peel	Young fruit period, June
CJ1-2_fpkm	Peel	Young fruit period, June
CJ1-3_fpkm	Peel	Young fruit period, June
CT2-1_fpkm	Peel	Fruit expansion period, August
CT2-2_fpkm	Peel	Fruit expansion period, August
CT2-3_fpkm	Peel	Fruit expansion period, August
CJ2-1_fpkm	Peel	Fruit expansion period, August
CJ2-2_fpkm	Peel	Fruit expansion period, August
CJ2-3_fpkm	Peel	Fruit expansion period, August
CT3-1_fpkm	Peel	Fruit maturity period, November
CT3-2_fpkm	Peel	Fruit maturity period, November
CT3-3_fpkm	Peel	Fruit maturity period, November
CJ3-1_fpkm	Peel	Fruit maturity period, November
CJ3-2_fpkm	Peel	Fruit maturity period, November
CJ3-3_fpkm	Peel	Fruit maturity period, November

Properties

Additional information about this analysis:


Property Name	Value
Data source file	public://expression/6509d708f24ee_15281-expression.txt

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