Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0

Overview
Analysis NameCitrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0
MethodIllumina NovaSeq 6000, PacBio Sequel II, Hi-C (Assembly with Canu, MInimap2)
SourceHuazhong Agriculture University
Date performed2024-01-31

 

About the assembly

For this genome, please cite Zheng et al, Evolution-guided multiomics provide insights into the strengthening of bioactive flavone biosynthesis in medicinal pummelo.  This data was originally downloaded from the Citrus Pan-genome to Breeding Database.  This data is also on NCBI under BioProject PRJNA911419 and the assembly accession number is GCA_029641205.1.  The listed BioSample isolate designation is HZY-T.

Assembly metrics

Assembly size 345 Mb
Number of scaffolds 10
N50 36,344,869 bp
Predicted transcripts 39,524
Annotated genes 26,926
Assembly BUSCO score (embryophyta_odb10) 99.0%
Annotation BUSCO score (embryophyta_odb10) 91.3%