FC868647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.052e-39 Identity = 94/222 (42.34%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 49 ILVFTLLFISSAHSFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACR-----VKVDAESAKNFKEKIDDEYRVNLILDNLPVAV---LRQRRDG-----SQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHK-DRETD---SARIVGFEVTPNSINHEYKEWSEKN 663 +L+F+L+ +SA FY+PGVAP +F ++DP+ +K KL+S++TQLPY+YY L +C+P+KI AENLGEVLRGDRI N+ ++ M + C+V C V + E ++ E+I ++Y V+LI DNLPVA L RD + +EHG+R+GF + K +++NHLSF + YH+ D E D + R+V FEV P SI E + EK+ Sbjct: 12 LLLFSLICETSA--FYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGF------TDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKS 225
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.052e-39 Identity = 94/222 (42.34%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 49 ILVFTLLFISSAHSFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACR-----VKVDAESAKNFKEKIDDEYRVNLILDNLPVAV---LRQRRDG-----SQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHK-DRETD---SARIVGFEVTPNSINHEYKEWSEKN 663 +L+F+L+ +SA FY+PGVAP +F ++DP+ +K KL+S++TQLPY+YY L +C+P+KI AENLGEVLRGDRI N+ ++ M + C+V C V + E ++ E+I ++Y V+LI DNLPVA L RD + +EHG+R+GF + K +++NHLSF + YH+ D E D + R+V FEV P SI E + EK+ Sbjct: 12 LLLFSLMCETSA--FYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGF------TDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKS 225
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.052e-39 Identity = 93/222 (41.89%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 49 ILVFTLLFISSAHSFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVAC-----RVKVDAESAKNFKEKIDDEYRVNLILDNLPVAV---LRQRRDG-----SQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHK-DRETD---SARIVGFEVTPNSINHEYKEWSEKN 663 +L+F+L+ + A FY+PGVAP +F ++DP+ +K KL+S++TQLPY+YY L +C+P+KI AENLGEVLRGDRI N+ ++ M + C+V C V + E ++ E+I ++Y V+LI DNLPVA L RDG + +EHG+R+GF + K +++NHLSF + YH+ D E D + R+V FEV P S+ E + EK+ Sbjct: 12 LLLFSLMCDTGA--FYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVTLTVEQSRLVAERISEDYYVHLIADNLPVATRLELYSNRDGDDKKKEKDVQFEHGYRLGF------TDVNKIYLHNHLSFILYYHREDLEEDREHTYRVVRFEVIPQSVRLEDLKADEKS 225
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.244e-37 Identity = 88/210 (41.90%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 88 SFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACR-----VKVDAESAKNFKEKIDDEYRVNLILDNLPVA----VLRQRRDG-----SQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHK-DRETD---SARIVGFEVTPNSINHEYKEWSEKN 663 +FY+PGVAP +F ++DP+ +K KL+S++TQLPY+YY L +C+P KI AENLGEVLRGDRI N+ ++ M + C+V C + + E ++ E+I +EY V+LI DNLPVA + RD + +EHG+R+GF + K +++NHLSF + YH+ D E D + R+V FEV P SI E + EK+ Sbjct: 23 TFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPIKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCNQSNKPITLTVEQSRLVAERITEEYYVHLIADNLPVATRLELYSSNRDSDDKKKEKDVQFEHGYRLGF------TDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKTGEKS 226
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.728e-37 Identity = 89/210 (42.38%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 88 SFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVAC-----RVKVDAESAKNFKEKIDDEYRVNLILDNLPVA----VLRQRRDG-----SQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHK-DRETD---SARIVGFEVTPNSINHEYKEWSEKN 663 +FY+PGVAP +F ++DP+ +K KL+S++TQLPY+YY L +C+P KI AENLGEVLRGDRI N+ ++ M + C+V C V + E ++ E+I +EY V+LI DNLPVA + RD + +EHG+R+GF + K +++NHLSF + YH+ D E D + R+V FEV P SI E + EK+ Sbjct: 23 TFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPNKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVILTVEQSRLVAERITEEYYVHLIADNLPVATRLELYSSNRDSDDKKKEKDVQFEHGYRLGF------TDVNKIYLHNHLSFILYYHREDTEEDQEHTYRVVRFEVIPQSIRLEDLKIDEKS 226
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29 Identity = 82/219 (37.44%), Postives = 127/219 (57.99%), Query Frame = 1 Query: 25 KKSTKTMKILVFTLLFISSAHS-FYLPGVAPRDFQRHDPLNVKVDKLSSTKTQLPYDYYFLK-YCKPAK-IVNSAENLGEVLRGDRIENSVYEFEMRED-LSCKV----ACRVKVDAESAKNFKEKIDDEYRVNLILDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYQG---SKEEKYFINNHLSFRVMYHKDRETDSARIVGFEVTPNSINHEYKE 648 K + K + + +F++ + FYLPG+ P DF + + +KV+K++S TQ+PY YY L C+P + I++ ENLGE+L GDRIENS Y F D CKV +C + E K +++I ++YRV+ +LD LPV R+ G ++ + GF +GF +G + EKY +NNHL + YH + +++RIVGFE+ P S +YK+ Sbjct: 2 KINKKQIVFFILFSIFLNHVNGIFYLPGMIPHDFAQGEEGAIKVNKITSVHTQIPYKYYQLPGVCQPKEGIIDDTENLGEILLGDRIENSDYTFNFLTDGGKCKVINSESCSPIIKKEDLKVLEDRIQNQYRVHWLLDGLPV-----RQTGRLAS--DPGFDLGFMTLAEGQTVATAEKY-LNNHLEITIFYHSNPTDNTSRIVGFEIFPTS--RQYKK 210
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 67/242 (27.69%), Postives = 107/242 (44.21%), Query Frame = 1 Query: 52 LVFTLLFISSAHSFYLPGVAPRDFQRHDPLNVKVDKLSSTKTQ------------------LPYDYYFLKY--CKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACRVKVDAESAKNFKEKIDDEYRVNLILDNLPVAVLRQRRDGSQSTT-YEHGFRVGFKGNYQGSKEEKY----------------------------FINNHLSFRVMYHKDRETDSARIVGFEVTPNSI 630 L+ F+S+ +FYLPGVAP ++ +D + + V+ L+ + YDYY+ ++ C+P K+ E+LG V+ GDRI NS ++ M ++ C+ C+ + + AK + I + + N ++D LP A R+ DG T+ Y GF +GF QG+ E + NH + YH DR + R+VG V P SI Sbjct: 10 LLLLYFFVSTVKAFYLPGVAPTTYRENDNIPLLVNHLTPSMNYQHKDEDGNNVSGDKENFLYSYDYYYNRFHFCQPEKVEKQPESLGSVIFGDRIYNSPFQLNMLQEKECESLCKTVIPGDDAKFINKLIKNGFFQNWLIDGLPAA--REVYDGRTKTSFYGAGFNLGFVQVTQGTDIEATPKGAETTDKDVELETRNDRNMVKTYELPYFANHFDIMIEYH-DRGEGNYRVVGVIVEPVSI 248
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18 Identity = 63/239 (26.36%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 19 PKKKSTKTMKILVFTLLFISSA------HSFYLPGVAPRDFQRHDPLN-------VKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACRVKVDAESAKNFKEKIDD-------EYRVNLILDNLPVAVLRQRRDGSQ--STTYEHGFRVGFKGNYQGS--------KEEKYFINNHLSFRVMYH-KDRETDSARIVGFEVTPNSINHEY 642 P + ++L+ +LL + + +FYLPG+AP +F + N + V++L S ++ LPY+Y +C+ ++ +ENLG+VL G+RIE S Y+F + +CK+ C + E A++ K+K+D Y+ + I+DN+PV + D + + + G + KG+ + + + + ++I NH+ ++ YH + + AR+V ++ P S H + Sbjct: 6 PASPPAQGSRLLLLSLLLLGTVPGPRPGSAFYLPGLAPVNFCAEEKSNECKADIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKKETCKLVCTKTYNTEKAED-KQKLDFLKKSMLLNYQHHWIVDNMPVTWCYEVEDSQKFCNPGFPIGCYITDKGHAKDACVISSEFHERDTFYIFNHVDIKIYYHVVETGSMGARLVAAKLEPKSFKHTH 243
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18 Identity = 62/240 (25.83%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 19 PKKKSTKTMKILVFTLLFISSA------HSFYLPGVAPRDFQRHDP--------LNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACRVKVDAESAKNFKEKIDD-------EYRVNLILDNLPVAVLRQRRDGSQ--STTYEHGFRVGFKGNYQGS--------KEEKYFINNHLSFRVMYH-KDRETDSARIVGFEVTPNSINHEY 642 P + ++L+ +LL + + +FYLPG+AP +F + + + V++L S ++ LPY+Y +C+ ++ +ENLG+VL G+RIE S Y+F ++ +CK+ C E A++ K+K+D Y+ + I+DN+PV + D + + + G + KG+ + + + + ++I NH+ ++ YH + + AR+V ++ P S H + Sbjct: 6 PASLPARGPRLLLLSLLLLGTVPGPRPGSAFYLPGLAPVNFCTEEKKSNECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKEETCKLVCTKTYHTEKAED-KQKLDFLKKSMLLNYQHHWIVDNMPVTWCYEVEDNQKFCNPGFPIGCYITDKGHAKDACVISSEFHERDTFYIFNHVDIKIQYHVVETGSMGARLVAAKLEPKSFRHTH 244
BLAST of FC868647 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18 Identity = 62/231 (26.84%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 46 KILVFTLLFISS------AHSFYLPGVAPRDFQRHDP--------LNVKVDKLSSTKTQLPYDYYFLKYCKPAKIVNSAENLGEVLRGDRIENSVYEFEMREDLSCKVACRVKVDAESAKNFKEKIDD-------EYRVNLILDNLPVAVLRQRRDGSQ--STTYEHGFRVGFKG--------NYQGSKEEKYFINNHLSFRVMYH-KDRETDSARIVGFEVTPNSINHEY 642 ++L+ +LL + + + FYLPG+AP +F + + + V++L S ++ LPY+Y +C+ ++ +ENLG+VL G+RIE S Y+F ++ +CK+ C E A++ K+K++ Y+ + I+DN+PV DG + + + G + KG N + + + ++I NH+ ++ YH + + AR+V ++ P S H + Sbjct: 15 RLLLLSLLLLGAVPGPRRSGGFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKEETCKLVCTKTYHTEKAED-KQKLEFLKKSMLLNYQHHWIVDNMPVTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACVINSEFHERDTFYIFNHVDIKIYYHVVETGSMGARLVAAKLEPKSFKHTH 244 The following BLAST results are available for this feature:
BLAST of FC868647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868647 ID=FC868647; Name=FC868647; organism=Citrus clementina; type=EST; length=663bpback to top |