FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_ARATH (50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=1 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 8.765e-82 Identity = 155/207 (74.88%), Postives = 175/207 (84.54%), Query Frame = 1 Query: 4 PSLLHSSASSFHGRFPALSSSSYVRPTYPNPINVNGVVSVKAAAGGIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 PSLL SSASSFHGRF L++ S R P NV VK +A G VLVEKSEAEKT RLKT YLE+I+P L+EEF Y NIHQVPK++KIVVNCGIGDAAQN KGLEAAM D+ALITGQ+P+KTRAR SIATFKIRE +PLGIAVTLRG++MYSFLDRLINL LPRTRDFQGV+P+SFDG+GNYSIGVK+Q VFPEIR+DA+GK R Sbjct: 4 PSLLQSSASSFHGRFSPLAAPSSARMLSPPLRNV-----VKVSASGTVLVEKSEAEKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTR 205
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_SPIOL (50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea GN=RPL5 PE=1 SV=2) HSP 1 Score: 261.536 bits (667), Expect = 2.924e-69 Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 1 Query: 130 AAGGIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE*MFAL-HNRKTDKEA 669 AAG V V+K+EAE RLKT Y+EK+VPLL+EEFSY+NI +VPK+ KIVVNCGIGDA+QNAKGL+AA+N+LALITGQRPVKT+A+ SIA FK+REG LGIAVTLRGN+MYSFLDRLINL LPRTRDFQGVNPNSFDGHGNYS+G +EQSVFPEI+ + +GK R + KTDKEA Sbjct: 1 AAGTAVFVDKAEAETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELALITGQRPVKTKAKTSIAGFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVNPNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVCITTTAKTDKEA 181
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_ORYSJ (50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL5 PE=2 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 7.714e-62 Identity = 116/178 (65.17%), Postives = 144/178 (80.90%), Query Frame = 1 Query: 139 GIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEA 669 GIVLV+ +EA+K RLK Y +K+VPL+ EEF YTN+HQVPK+EKIVVNCG+G A N+KGLE+AM DLA+ITGQ PVKT+A+ S+A+FKIREG +GIAVTLRG +M++FLDRLINLGLPRT DF GVNPNSFDGHGN++IG+++Q VFPEI Y+ GK + + KTD EA Sbjct: 63 GIVLVDPTEAQKVHRLKAVYDQKVVPLITEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQGVFPEIPYEVGGKKNGMDVCIVTTAKTDNEA 240
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNY3 (50S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803) GN=rplE PE=3 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.487e-52 Identity = 100/167 (59.88%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 T RLKT Y E I+P L+EEF Y NIHQVPK+ K+ VN G+G+A+QNAK LE+++ +LA ITGQ+PV TRAR +IA FKIREG P+G+ VTLR MY+FLDRLINL LPR RDF+G++PNSFDG GNYS+G++EQ +FPEI YD + + R + + + +TD+E R Sbjct: 2 TQRLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CYAP4 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplE PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.451e-52 Identity = 96/148 (64.86%), Postives = 120/148 (81.08%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLKT YLE VP L E+F Y NIHQVPK+ KI +N G+G+AAQNAK LEA++N++ALI GQ+PV TRA+ +IA FKIR+G P+GI VTLR + MY+F DRLINL LPR RDF+GVNP SFDG GNYS+G++EQ +FPEI YD++ + R Sbjct: 4 RLKTYYLENAVPKLMEQFKYKNIHQVPKLVKITINRGLGEAAQNAKSLEASLNEIALIAGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRSDRMYAFFDRLINLALPRIRDFRGVNPKSFDGRGNYSLGLREQLIFPEISYDSIDQMR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_MICAN (50S ribosomal protein L5 OS=Microcystis aeruginosa (strain NIES-843) GN=rplE PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51 Identity = 99/165 (60.00%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 +LKTTY E IVP L+E+F YTNIHQVPK+ KI VN G+G+A+QNAK LE++ +L+ ITGQ+PV TRA+ +IA FKIREG P+G+ VTLRG+ MY+FLDRLINL LPR RDF+G++ NSFDG GNYS+G++EQ +FPEI YD + + R + + K D+E R Sbjct: 4 KLKTTYQETIVPKLKEQFGYTNIHQVPKVIKITVNRGLGEASQNAKALESSKAELSTITGQQPVVTRAKKAIAGFKIREGMPVGVMVTLRGDRMYAFLDRLINLALPRIRDFRGISGNSFDGRGNYSLGIREQLIFPEIEYDKIDQIRGMDISIITTAKNDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CYAP7 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7424) GN=rplE PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51 Identity = 99/167 (59.28%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 T RLKT Y E IVP L+E+F+YTNIHQVPK+ K+ VN G+GDA+QNAK LE+++ +LA ITGQ+PV TRAR +IA FKIR+G P+G+ VTLR MY+FLDRLI+L LPR RDF+G++ NSFDG GNYS+G++EQ +FPEI YD + + R + + +TD+E R Sbjct: 2 TQRLKTVYYETIVPKLKEQFNYTNIHQVPKVIKVTVNRGLGDASQNAKALESSIAELATITGQKPVVTRARKAIAGFKIRKGMPVGVMVTLRSERMYAFLDRLISLALPRIRDFRGISGNSFDGRGNYSLGIREQLIFPEIDYDKIDQIRGMDISIITTAQTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ANASP (50S ribosomal protein L5 OS=Anabaena sp. (strain PCC 7120) GN=rplE PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.691e-51 Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE-*MFALHNRKTDKEAR 672 T RLKT Y E IVP L ++F YTN+HQVPK+ KI VN G+G+AAQNAK LEA++ ++A ITGQ+PV TRA+ +IA FKIR+G P+GI VTLRG MY+F DRLI+L LPR RDF+G++P SFDG GNY++GV+EQ +FPEI YD++ + R + + K D+E R Sbjct: 3 TTRLKTLYQETIVPKLTQQFQYTNVHQVPKLVKITVNRGLGEAAQNAKSLEASLTEIATITGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRGERMYAFFDRLISLSLPRIRDFRGISPKSFDGRGNYTLGVREQLIFPEIEYDSIDQIRGLDISIITTAKNDEEGR 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ANAVT (50S ribosomal protein L5 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplE PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.126e-51 Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE-*MFALHNRKTDKEAR 672 T RLKT Y E I+P L ++F YTN+HQVPK+ KI VN G+G+AAQNAK LEA++ ++A ITGQ+PV TRA+ +IA FKIR+G P+GI VTLRG MY+F DRLI+L LPR RDF+G++P SFDG GNY++GV+EQ +FPEI YD++ + R + + K D+E R Sbjct: 3 TTRLKTLYQETIIPKLTQQFQYTNVHQVPKLVKITVNRGLGEAAQNAKSLEASLTEIATITGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRGERMYAFFDRLISLSLPRIRDFRGISPKSFDGRGNYTLGVREQLIFPEIEYDSIDQIRGLDISIITTAKNDEEGR 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNWW (50S ribosomal protein L5 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rplE PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.365e-50 Identity = 98/166 (59.04%), Postives = 126/166 (75.90%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE-*MFALHNRKTDKEARD 675 RL TY + IVP + E+F Y NI QVPK+E++VVN G+G+A QN K L+ A+NDL++I+GQ+PV TRAR SIA FK+REG +G VTLRG MY FLDRLINL LPR RDF+GV+P +FDG GNYS+G+KEQ++FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLYETYKKDIVPKMMEKFQYDNIMQVPKVERVVVNIGVGEAIQNPKALDGAVNDLSIISGQKPVITRARKSIAGFKLREGMAIGCKVTLRGERMYDFLDRLINLALPRVRDFRGVSPQAFDGRGNYSLGIKEQTIFPEIDYDKIDKIRGLEVVVVTTAKTDEEARE 168 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |