FC872622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.303e-36 Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAA---KEWRERKDEFKKKVSRCVRKSL 515 L + PV+GF LVDE +++ W V+I GPP+T YEGG+F A + FP +YP SPP RF +KMWHPN+Y G VCISILHPP DDP EL +ERW P V PN SPAN+DA+ ++W+E K + ++ + +RK + Sbjct: 20 LQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK-DREYTDIIRKQV 169
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31 Identity = 67/157 (42.68%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 527 L +NP + F V+E+N+ EW V + GPPDTLYEGG F A + FP YP +PP + FTS+MWHPN+YPDG++CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 13 LIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKSLDECS 163
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.308e-31 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 527 L +NP + F V+E+++ EW V + GPPDTLYEGG F A + FP YP +PP + FTS+MWHPN+YPDGK+CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V R V+KSL+ S Sbjct: 13 LIENPSENFKIS-VNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKSLDECS 163
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.308e-31 Identity = 68/158 (43.04%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 527 +L +NP + F V+E+N+ EW V + GP DT YEGG F A +TFP NYP PP + FTS+MWHPN+YPDG++CISILH + G W+P +E PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 12 NLTENPSEHFKVS-VNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGM-----TWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKSLDECS 163
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 527 L +NP + F V+E+N+ EW V + GP DTLYEGG F A + FP NYP PP + FTS+MWHPN+Y DG+VCISILH + G W+PV ++ PN +SPAN+DAAK +R E + + +V R V+KSL+ S Sbjct: 13 LTENPSENFKVS-VNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGM-----TWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKSLDECS 163
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.221e-30 Identity = 67/158 (42.41%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWR-----ERKDEFKKKVSRCVRKSLEMLS 527 +L NP + F V+E N+ EW V + GPPDTLYEGG F A + FP YP PP + FTS+MWHPN+Y DGK+CISILH + G W+P ++ PN +SPAN+DAAK +R E + + +V + V+KSL+ S Sbjct: 12 NLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGM-----TWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKSLDECS 163
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.598e-29 Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 78 KNPVDGFSAGLVDESNVFEWSVSI-IGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 K + F L D+SN+F W++ + + D++Y GGFF A M FP+++P SPP RFT ++HPNVY DG++CISILH G DP E E W+PV TVE PN SPAN+DAA ++R+ +++K++V V +S Sbjct: 23 KKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSG-DPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERS 167
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148 The following BLAST results are available for this feature:
BLAST of FC872622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872622 ID=FC872622; Name=FC872622; organism=Citrus clementina; type=EST; length=761bpback to top |