FC872622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.293e-71 Identity = 122/151 (80.79%), Postives = 133/151 (88.08%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEM 521 DLCK+PVDGFSAGLVDE N+FEWSV+IIGPPDTLYEGGFFNAIMTFP NYP SPPTVRFTS MWHPNVY DG+VCISILHPPGDDP+GYELA+ERWTPVHTVE PNDESPAN++AAKEWR+++DEFKKKVSRCVRKS EM Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.912e-71 Identity = 121/151 (80.13%), Postives = 133/151 (88.08%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEM 521 DLCK+PVDGFSAGLVDE N+FEWSV+IIGPPDTLYEGGFF AIM+FP NYP SPPTVRFTS +WHPNVYPDG+VCISILHPPGDDP+GYELA+ERWTPVHTVE PNDESPAN++AAKEWRE++DEFKKKVSRCVRKS EM Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.438e-70 Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEML 524 DLCK PVDGFSAGLVDE NVF+WSVSI+GPPDTLYEGGFFNAIM+FP+NYPVSPPTV FTS+MWHPNVY DGKVCISILHPPGDDP+GYELA+ERWTPVHTVE PNDESPAN++AAKEWR+ + EF+KKVSRCVR+S EML Sbjct: 16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.443e-62 Identity = 110/147 (74.83%), Postives = 123/147 (83.67%), Query Frame = 3 Query: 84 PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEML 524 P GF G VD+SNVFEW V+IIGPP+TLY+GG+FNAIM+FP NYP SPPTVRFTS+MWHPNVYPDG+VCISI HPPGDDPNGYELA+ERWTPVHTVE PNDESPANI+AAK+WRE++DEFKKKV R VRKS EML Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.619e-53 Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEML 524 ++ KNP GFS GLVD+ ++FEW V IIGP DTLYEGGFF+A ++FP +YP+ PP ++FT+++WHPNV+P+G+VCISILHPPGDD GYE A ERW PVH+ E PNDESPANIDAAKE+RE EFKK+V R VR+S+EM+ Sbjct: 16 EIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 4.780e-50 Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRE-RKDEFKKKVSRCVRKSLE 518 +L KNPV+GFSAGL+D+++++ W V IIGPPDTLYEGG F A +TFP +YP+ PP ++F +++WHPNV +G VCISILH PG+D GYE ERW P+HTVE PN +SPAN+DAAKEWRE R EFK+KV+RCVRKS E Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 4.780e-50 Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRE-RKDEFKKKVSRCVRKSLE 518 +L KNPV+GFSAGL+D+++++ W V IIGPPDTLYEGG F A +TFP +YP+ PP ++F +++WHPNV +G VCISILH PG+D GYE ERW P+HTVE PN +SPAN+DAAKEWRE R EFK+KV+RCVRKS E Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 4.780e-50 Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRE-RKDEFKKKVSRCVRKSLE 518 +L KNPV+GFSAGL+D+++++ W V IIGPPDTLYEGG F A +TFP +YP+ PP ++F +++WHPNV +G VCISILH PG+D GYE ERW P+HTVE PN +SPAN+DAAKEWRE R EFK+KV+RCVRKS E Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.098e-49 Identity = 89/151 (58.94%), Postives = 112/151 (74.17%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRE-RKDEFKKKVSRCVRKSLE 518 +L KNPV+GFSAGL+D+++++ W V IIGPPDTLYEGG F A +TFP +YP+ PP ++F +++WHPNV +G VCISILH PG+D GYE RW P+HTVE PN +SPAN+DAAKEWRE R EFK+KV+RCVRKS E Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.902e-49 Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLE 518 D+ + PVDGFSAGLVD++++++W V +IGPPDTLYEGGFF AI+ FP +YP PP ++F S++WHPN+ +G VCISILH PGDD GYE ERW PVHTVE PN ESPAN+DAAK RE EFKKKV++CVR+S E Sbjct: 14 DMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163 The following BLAST results are available for this feature:
BLAST of FC872622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872622 ID=FC872622; Name=FC872622; organism=Citrus clementina; type=EST; length=761bpback to top |