FC872622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ +W+ I GP T +E G F ++ F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22 Identity = 57/147 (38.78%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ W+ I GP T +E G F + F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22 Identity = 57/147 (38.78%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G E+N+ W+ I GP T +E G F + F + YP PPTVRF SKM+HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E K E++K+VS V +S Sbjct: 16 LQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ-------------NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22 Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G ++N+ W+ I GP DT +E G F + F + YP PPTVRF SK++HPNVY DG +C+ IL RW+P + V PN SPAN AA+ ++E + E++K+V CV +S Sbjct: 16 LQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQ-------------NRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L K+P G S G ++N+ W+ I GP DT ++GG F + F ++YP PP VRF S+M+HPN+Y DG +C+ IL +W+P++ V PN +SPAN +AA+ + E K E+ +KV V +S Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 102 AGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 +G + N+ W+ I GPP+T +E G F +TF D YP PPTVRF SKM+HPN+Y +G++C+ IL RW+P + V PN SPAN+DAA+ ++E E++++V + V S Sbjct: 25 SGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQ-------------NRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVELS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.472e-22 Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 96 FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISIL-HPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLEML 524 + G ++ + W + D+LY G A+M FP +YP+ PPT++F SKM+HPN+Y DGK+CISIL D + + ++WTPV + PN SPAN+DA+ +R+ +E+ K+V R R+ E L Sbjct: 55 YPRGSMENRDYKVWDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIAREEDEKL 198
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 72 LCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 L ++P G S G ++N+ W+ I GP DT ++GG F + F ++YP PPTVRF S+M+HPN+Y DG +C+ IL +W+P++ V PN SPAN +AA+ + E K E+ +KV V +S Sbjct: 16 LQQDPPAGIS-GAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQS 148
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22 Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 123 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLE 518 NV W+ IIGP DT YE G F ++ F + YP PP V+F S+M+HPNVY +G++C+ IL RWTP + V PN SPAN++AA +++ K ++ K+V V KS E Sbjct: 32 NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 The following BLAST results are available for this feature:
BLAST of FC872622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872622 ID=FC872622; Name=FC872622; organism=Citrus clementina; type=EST; length=761bpback to top |