FC872622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.824e-18 Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = 3 Query: 123 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 512 ++ W V I G P T +EGG + M FP+ YP PP RFT ++HPNVYP G VC+SIL+ E W P T++ PN SPA +A +++ K E++K+V R++ Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN-----------EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAREN 155
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT+K++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT+K++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP + FT+K++HPN+ +G +C+ IL +W+P TV PN + P D A+ ++ K+++ + +K Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.833e-17 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSR 497 +L P G SA D N+F W +I G DT+YE F + FP +YP PPTV+F ++ +HPNV +G +C+ IL ++W+PV+ V PN+ESP N AA W +DE+KK + + Sbjct: 17 NLMMGPSPGISA-FPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDIL-------------KDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW-SNQDEYKKVLDK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.552e-16 Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V + ++F W +I+GPPD+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ ++++ + RK Sbjct: 12 DLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.647e-16 Identity = 43/124 (34.68%), Postives = 59/124 (47.58%), Query Frame = 3 Query: 114 DESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 D N+F+W ++ GP DT+YE + + FP +YP PP V+FT+ WHPNV G +C+ IL E WT + V PN+ SP N AA W + E+KK Sbjct: 55 DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-------------KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKK 164
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.647e-16 Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V E ++F W +I+GP D+ Y+GG F + FP YP PP V FT++++HPNV +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + +K Sbjct: 12 DLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.647e-16 Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V E ++F W +I+GP D+ Y+GG F + FP YP PP V FT++++HPNV +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + +K Sbjct: 12 DLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16 Identity = 43/147 (29.25%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL ++P SAG V E ++F W +I+GP D+ Y GG F + FP +YP PP V FT++++HPN+ +G +C+ IL ++W+P T+ PN + P + A ++ + +++ RK Sbjct: 12 DLGRDPPSSCSAGPVGE-DLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRK 144 The following BLAST results are available for this feature:
BLAST of FC872622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872622 ID=FC872622; Name=FC872622; organism=Citrus clementina; type=EST; length=761bpback to top |