FC872622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 45/147 (30.61%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL K+P SAG V E ++F W +I+GP D+ Y GG F + FP +YP PP V F +K++HPN+ +G +C+ IL E+W+P T+ PN + P + A ++ K++++ +K Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 44/147 (29.93%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 DL K+P SAG V E ++F W +I+GPP++ Y GG F + FP +YP PP V F +K++HPN+ +G +C+ IL E+W+P T+ PN + P + A ++ + +++ +K Sbjct: 12 DLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQK 144
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 42/147 (28.57%), Postives = 68/147 (46.26%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 509 D+ ++P SAG V E ++F W +I+GP D+ Y GG F + F +YP PP V F +K++HPN+ G +C+ IL E+W+P T PN P + A ++ K +++ + +K Sbjct: 12 DMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQK 145
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 69 DLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKK 485 DL ++P SAG V + ++F W +I+GP D+ Y+GG F + FP +YP PP V FT++++HPN+ +G +C+ IL +W+P T+ PN + P + A+ ++ +D++ + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC872622 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15 Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = 3 Query: 123 NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSKMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVEXXXXXXXXXXXXPNDESPANIDAAKEWRERKDEFKKKVSR 497 N+F W +I G DT++EGG + M F D++P +PP +F ++HPNVYP G VC+S+L D W P +++ PN E PA +A + + + + E++K+V + Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150 The following BLAST results are available for this feature:
BLAST of FC872622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872622 ID=FC872622; Name=FC872622; organism=Citrus clementina; type=EST; length=761bpback to top |