FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 211 GSSDAK-NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 711 G ++AK + K+VL+GDS VGKS I+ RF R +F SK T+G F ++T+ + D TVK +IWDTAGQERY A+ YYRG YDIT +F+ W++EL+ H +IV+ L+GNK DL +R+VP +D E+AEK G+FF+ETSA A N+ F + Sbjct: 8 GDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI-DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTV 174
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.574e-36 Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 702 K+VL+GDS VGKS I+ RF R +F SK T+G F ++T+A+Q + VK +IWDTAGQERY A+ YYRG YDIT +F+ W++EL+ H +IV+ L+GNK DL ++R VP +D E+A+K G+FF+ETSA A N+ F Sbjct: 17 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKS-VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAF 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.574e-36 Identity = 75/172 (43.60%), Postives = 109/172 (63.37%), Query Frame = 1 Query: 214 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 + D + KLVL+GDSGVGKS ++ RF + +F+ SK T+G F ++T+ + D+ VK +IWDTAGQERY A+ YYRG YD+T +F A W+KEL+ H P+IV+ L+GNK+DL VP +DG +AE+ ++F+ETSA A N+ F E+ ++ R Sbjct: 6 TDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNV-DAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYR 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.488e-36 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+VL+GDSGVGKS ++ RF R +F SK T+G F ++T+ ++ TVK +IWDTAGQERY A+ YYRG YD+T P +F W+KEL+ H +IV+ L+GNK DL R V +D YAEK G+ FIETSA A N+ + F+ I + R Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE-GRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYR 175
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.277e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+VL+GDSGVGKS ++ RF + +F+ SK T+G F ++T+ + D VK +IWDTAGQERY A+ YYRG YD+T +F W+KEL+ H P+IV+ LVGNK+DL VP +DG YAE+ + F+ETSA A N+ F E+ ++ R Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKV-DGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYR 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35 Identity = 82/192 (42.71%), Postives = 115/192 (59.90%), Query Frame = 1 Query: 232 LRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDS-------TTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQ-KHGSPDIVMALVGNKADLHEK--------------------REVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 L+ KLVLLGDS VGKS IV RFV+ FD + T+GA+FLSQ+I + + +KFEIWDTAGQERY +LAP+YYR YDIT DS KA+ WV EL+ K G D+V+ L+GNK DL ++ R + ++ +YA++ G+ F E SAKT + + ++F++I ++L Sbjct: 2 LQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKL 193
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35 Identity = 74/172 (43.02%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 214 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 + D + KLVL+GDSGVGKS ++ RF R +F+ SK T+G F ++++ + D +K +IWDTAGQERY A+ YYRG YD+T +F A W+KEL+ H P+IV+ L+GNK+DL V +DG +AEK ++F+ETSA A N+ F E+ ++ R Sbjct: 6 ADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI-DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYR 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |