FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.233e-55 Identity = 107/176 (60.80%), Postives = 136/176 (77.27%), Query Frame = 1 Query: 214 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPS 741 SS NL KLVLLGD G GKS +V+RFV+GQF + T+GA+F S T+A+ ++T VKFEIWDTAGQERY +LAP+YYRG YDITS DSF +A+ WV+ELQK G+P++VMAL GNKADL ++R+V A++ YAE+NG+FF+ETSAKTA N+N +F EIAKRLPR P+ Sbjct: 3 SSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPA 177
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.963e-54 Identity = 103/171 (60.23%), Postives = 133/171 (77.78%), Query Frame = 1 Query: 229 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPS 741 NL KLVLLGD G GKS +V+RFV+GQF + T+GA+F S T+++ ++T VKFEIWDTAGQERY +LAP+YYRG YDITS +S +A+ WV+ELQK G+P++VMAL GNKADL +KR+V A++ YAE+NG+FF+ETSAKTA N+N +F EIAKRLPR P+ Sbjct: 8 NLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPA 177
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.735e-52 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YAE N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.271e-51 Identity = 102/176 (57.95%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 214 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPS 741 SS KN+ KLVLLGD G GKS +VLRFV+ QF + T+GA+F SQT+A+ D+T VKFEIWDTAGQERY +LAP+YYRG +DIT+ SF +A+ WV+ELQ G+P++VMAL GNKADL + R+V A++ YA++N +FF+ETSAKTA N+ +F EIAKRLPR P+ Sbjct: 3 SSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPA 177
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.271e-51 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V QD YA+ N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5A_DICDI (Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.271e-51 Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 1 Query: 214 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 +++ K + KLVLLG++ VGKS +VLRFVRG F + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY LAP+YYRG YDI S DSF +A WVKELQ+ GSP+IV+AL GNK DL KR+V + +YAE+NG+ F+ETSAKT+ N+N+LF EIAK+LP+ Sbjct: 2 NNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLND-TTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPK 172
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.169e-51 Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.169e-51 Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.169e-51 Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.169e-51 Identity = 102/180 (56.67%), Postives = 132/180 (73.33%), Query Frame = 1 Query: 205 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 N ++ K + KLVLLG+S VGKS +VLRFV+GQF + T+GA+FL+QT+ L D TTVKFEIWDTAGQERY +LAP+YYRG YDIT+ D+F +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKTA N+N++F IAK+LP+ P + Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN 189 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |