FC875468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: Y245_SYNY3 (Uncharacterized protein slr0245 OS=Synechocystis sp. (strain PCC 6803) GN=slr0245 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 2 Query: 200 SSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYP----ANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 S + A LA + ++ + V + + F + RPPGHHA + MGFCL NNVA+AA + L RP G+ ++ I+DWDVHHGN T+ + +PR+ + S+H+ YP A D G + + +N+P + G G Y ++H +LP + PD++++SAG+D Sbjct: 91 SYDVARLAVRAWLDGVDHVLN-QREAVFVLARPPGHHAIRNTGMGFCLLNNVAIAAHYALT-RP--GVERVAILDWDVHHGNGTEALVDHNPRIFYCSLHQF---PCYPGTGAAGDRGQHDNV---------LNIPLKPGGDGKV-YREAFEHKVLPFLRQVKPDLLLVSAGYD 247
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAW (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MW2) GN=acuC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 69/225 (30.67%), Postives = 117/225 (52.00%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A D L+ +H ++V IK+ S + ++++ + + NS + + A + G + +A+ + G++ + + HHA+P A GFC+YN++A+ A +L E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E DA +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKHMHRHSATIV--GGALTLADLIMSGKVLNGCHLGGGL-HHAQPGRASGFCIYNDIAITAQYLAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAS (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MSSA476) GN=acuC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 69/225 (30.67%), Postives = 117/225 (52.00%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A D L+ +H ++V IK+ S + ++++ + + NS + + A + G + +A+ + G++ + + HHA+P A GFC+YN++A+ A +L E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E DA +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKHMHRHSATIV--GGALTLADLIMSGKVLNGCHLGGGL-HHAQPGRASGFCIYNDIAITAQYLAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: HDA22_DICDI (Type-2 histone deacetylase 2 OS=Dictyostelium discoideum GN=hdaC PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 69/204 (33.82%), Postives = 100/204 (49.02%), Query Frame = 2 Query: 128 SSKQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHA------EPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVH-RHEFGTFYP--ANDDGFYTMI-GEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 S K F+ D I +++ S +AA A+GSV + V+ AF +RPPGHHA + G+CL NNVA+ A + G ++I +VD+DVHHGN TQ++ D LF S+H E FYP D G + G+ G NI + G A +L W + ++P + + P +I +SAGFD Sbjct: 1157 SHKDFEGDDDNIYDT----FVSHRSIKAALRASGSVCAAVDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYA---SLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILNIGL---KRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFD 1350
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAC (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain COL) GN=acuC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 68/225 (30.22%), Postives = 116/225 (51.56%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A D L+ +H ++V IK+ S + ++++ + + N + + A + G + +A+ + G++ + + HHA+P A GFC+YN++A+ A +L E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E DA +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIV--GGALTLADLIMSGKVLNGCHLGGGL-HHAQPGRASGFCIYNDIAITAQYLAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: APHA_MYCRA (Acetylpolyamine aminohydrolase OS=Mycoplana ramosa GN=aphA PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 65/177 (36.72%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 188 LNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCK---DFGPDIIIISAGFD 709 ++ G+ EAA + S I+ A+ +A G +AF++ RPPGHHA D G+C NN AVAA LL++ G KI I+D D HHGN TQ +F++ V F S+H F + G+ G+G G G N P G +VW L K FG + I++S G D Sbjct: 120 ISPGTWEAALSSMASAIDGADLIAAGH-KAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDK----GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAF--PHFLGYAEETGKGAGAGTTANYP-----MGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVD 284
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAR (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MRSA252) GN=acuC PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 69/226 (30.53%), Postives = 115/226 (50.88%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGE-LNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A D L+ +H ++V IK+ S + ++ + + + N + + A + G + +A+ + G+ LN + HHA+P A GFC+YN++A+ A +L E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E D+ +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAMKYGLNDEENGQFKHMHRHSATIV--GGALTLADLIMSGKALNGCH--LGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAN (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain N315) GN=acuC PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19 Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A L+ +H ++V IK+ S + ++++ + + N + + A + G + +A+ + G++ + + HHA+P A GFC+YN++A+ A ++ E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E DA +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIV--GGALTLADLIMSGKVLNGCHLGGGL-HHAQPGRASGFCIYNDIAITAQYIAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: ACUC_STAAM (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19 Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 2 Query: 47 VLNSKEAKDKNLLSVHTENHVNLIKNISS---KQFDSRRDRIASKLNSIYLNEGSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPGHHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTF-YPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 ++ + A L+ +H ++V IK+ S + ++++ + + N + + A + G + +A+ + G++ + + HHA+P A GFC+YN++A+ A ++ E + ++LI+D D HHG+ TQ F+ D V +S+ HE G F +P + G YT GE G G+ +NVP E DA +L + + P K F PDII+ G D Sbjct: 50 IVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIV--GGALTLADLIMSGKVLNGCHLGGGL-HHAQPGRASGFCIYNDIAITAQYIAKEYNQ----RVLIIDTDAHHGDGTQWSFYADNHVTTYSI--HETGKFLFPGS--GHYTERGEDIGYGHTVNVPLE-PYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262
BLAST of FC875468 vs. ExPASy Swiss-Prot
Match: PHD1_SCHPO (Histone deacetylase phd1 OS=Schizosaccharomyces pombe GN=phd1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 63/235 (26.81%), Postives = 117/235 (49.79%), Query Frame = 2 Query: 26 GIPRRCVVLNSKEAKDKNLLSVHTENHVNLIKNISSKQFDSRRDRIASKLNSIYLNE------GSSEAAYLAAGSVIEVAERVAEGELNSAFAIVRPPG-HHAEPDEAMGFCLYNNVAVAASFLLNERPELGINKILIVDWDVHHGNSTQKMFWKDPRVLFFSVHRHEFGTFYPANDDGFYTMIGEGPGLGYNINVPWENGRCGDADYLAVWDHILLPGCKDFGPDIIIISAGFD 709 G+ + V + + A + H E++++ +K ++ ++ A K + + G+ E + +AG+ ++ + ++ +G+ + AI G HHA+ EA GFC N++ +A +L P ++L +D D+HHG+ Q+ F++ RVL S H++ G F+PA G + G G + +NVP E+G GD Y +++ I+ P F P I++ G D Sbjct: 63 GLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTP----DNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTD--IAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFP-----RVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYN-GDFFPAT--GNFDENGVKGGKYFALNVPLEDG-IGDEQYTSLFKSIIEPTINTFQPSAIVLQCGAD 282 The following BLAST results are available for this feature:
BLAST of FC875468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875468 ID=FC875468; Name=FC875468; organism=Citrus clementina; type=EST; length=710bpback to top |