FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_DESHY (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 LK+T L++ H G K++ F GW MP+QY ++E R LFDVSHM + LKGKD + FL+ L+ DV+ + + GG +DD ++ + +H LVVNA DKD A ++A + F Sbjct: 4 LKRTPLYEQHRRAGAKLIDFGGWEMPVQYA-GVIEEHKAVRSKAGLFDVSHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNAANTDKDFAWMQAQAEGF 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_DESHD (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 LK+T L++ H G K++ F GW MP+QY ++E R LFDVSHM + LKGKD + FL+ L+ DV+ + + GG +DD ++ + +H LVVNA DKD A ++A + F Sbjct: 4 LKRTPLYEQHRRAGAKLIDFGGWEMPVQYA-GVIEEHKAVRSKAGLFDVSHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNASNTDKDFAWMQAQAEGF 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CLOBM (Aminomethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19 Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 E LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + GKD F++ L+ D+ L T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS Sbjct: 2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIADVS 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BORPD (Aminomethyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIE 593 +LK+T L D HVA G +MV F GW MP+ Y S +E R++ +FDVSHM + + G D FL +LV DVA L PG + N GG IDD ++ D +VVNA DKD+A ++ Sbjct: 4 SLKRTPLADAHVAAGARMVDFGGWDMPLAY-GSQLEEHHAVRRDAGMFDVSHMLNVDVTGPDATAFLRRLVANDVARLTVPGKALYSCMLNPQGGIIDDLIVYFFAADQWRVVVNAATADKDVAWMQ 129
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THET2 (Aminomethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 +KKT L++ H+ G +MV FAG+ +P+QY SI+E L R+ +FDVSHM ++G++ + FL+ D L G ++ NE GG +DD + ++ ++ +VVNA KDLAH++A K F + D S Sbjct: 1 MKKTPLYEAHLRLGARMVDFAGYLLPLQYT-SIVEEHLAVRRAVGVFDVSHMGEFLVRGEEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKDLAHLQALAKGFRVELEDAS 138
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEFN (Aminomethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 55/130 (42.31%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MPI Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D H +VVN+ RDKDLA I +F Sbjct: 4 KTVLFNKHLESKAKMVDFHGWEMPINYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGSDACAFLRKLLANDVAKLTVPGKALYGGMLDENAGIIDDLITYYLTDTHYRVVVNSATRDKDLAWINKQAAAF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PHOLL (Aminomethyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=gcvT PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L+D H+A G +MV F GW MP+ Y + E + R + +FDVSHM + L G C FL L+ D+A L G T N +GG IDD ++ + +D LVVN+ R+KDLA I H+ ++ Sbjct: 3 KQTPLYDQHLACGARMVDFHGWMMPLHYGSQMDEHHI-VRTHAGMFDVSHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYLSNDFYRLVVNSATREKDLAWINEHVANY 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BDEBA (Aminomethyltransferase OS=Bdellovibrio bacteriovorus GN=gcvT PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 55/130 (42.31%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLV-VNAGCRDKDLAHIEAHMK 605 +KKT L D H G +MV FAGW MP+QY + E N R N LFDVSHM + +KG + LE L DV+ L G ++ N+ GG +DD ++ + D YLV VNA +DKD A + H K Sbjct: 1 MKKTPLADTHEKLGARMVDFAGWYMPVQYI-GLREEHNNVRTNVGLFDVSHMGEVRVKGPKALETLEWLTTNDVSKLNDGEAQYSLLPNDQGGLVDDIIVYCLSKDSDYLVCVNASNKDKDFAWMTKHNK 129
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACWK (Aminomethyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 L++T L D + GGK V F GW +P+Q+ SI E R LFDVSHM + +KG D + FL+++V DV+ L G T ENGG++DD +I K ++ LV+NA +KD + +H+ Sbjct: 4 LQRTPLFDVYAKYGGKTVDFGGWELPVQFS-SIKEEHEAVRTGAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STACT (Aminomethyltransferase OS=Staphylococcus carnosus (strain TM300) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18 Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LKKT L+D V + K+V F GW+MP+Q+ SI E R+ +FDVSHM + ++GKD F++ ++ D L T N+ GG IDD + K+ + LVVNA +KD I +H ++F K +VS Sbjct: 2 SNDLKKTPLYDRFVESNAKIVEFGGWAMPVQFS-SIKEEHNAVREVMGIFDVSHMGEVLIEGKDASDFIQYILSNDTDQLTDNKAQYTALCNDKGGIIDDLITYKLDNQKYLLVVNAANTEKDYNWINSHSENFDVKVENVS 142 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |