FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CLOBL (Aminomethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18 Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 E+LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + GKD F++ L+ D+ L T NE+GG IDD ++ K D +LV+NA +DKD+ I H F + DVS Sbjct: 2 EDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAGDEFFLVINASNKDKDVKWIMGHKGDFDVEIVDVS 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CLOBJ (Aminomethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18 Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 E LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + GKD F++ L+ D+ L T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS Sbjct: 2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ACIBL (Aminomethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18 Identity = 48/142 (33.80%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD--SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 N++KTAL+ H +G KMV ++GW MP++Y +M+ L R LFDVSHM + + G + + ++ L + D + L G + NG +DD ++ K DD LV+NAG R+KD+ ++ + + F D+S Sbjct: 8 NIRKTALNATHRQSGAKMVDYSGWDMPVEYPSVGGLMKEHLAVRAGVGLFDVSHMGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYLLVINAGTREKDVNWVKDNTRQFKVTVEDLS 149
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THELT (Aminomethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +++T L++ HV+ G KM+ FAGW MP+QY SI + R+N +LFDVSHM + ++G+D V F++ L+ L G TV NE GG IDD + + + LVVNA +KD I K F Sbjct: 1 MRRTPLYESHVSLGAKMIDFAGWEMPLQYT-SINDEVATVRKNVALFDVSHMGEIFVEGEDTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRFGEKQAMLVVNAANIEKDFDWIVNQSKQF 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STRM5 (Aminomethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 54/131 (41.22%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KT L+D H A G KMV F GW MPI Y + E L R++G +FDVSHM + L+G PFL +L+ V L G + N GG IDD ++ + DD +VVNA R+KDLA + F Sbjct: 3 QKTLLNDTHRALGAKMVDFGGWDMPIHYGSQLDEHHLVRRESG-VFDVSHMTVVDLRGDQVKPFLRRLLANSVDKLKVTGKALYSCMLNPRGGVIDDLIVYYLGDDFFRMVVNASTREKDLAWLREQAAPF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEWM (Aminomethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 53/130 (40.77%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + N G IDD + + D H +VVN+ R+KDLA I +K F Sbjct: 4 KTVLFNKHLESDAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVNGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLNDTHYRIVVNSATREKDLAWIAQEVKGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEHH (Aminomethyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 53/133 (39.85%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 KT L + H+ + GKMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + NGG IDD + + D +VVN+ R+KDLA I + F+ + Sbjct: 4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEYRIVVNSATREKDLAWINEQVNGFSVE 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHESH (Aminomethyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18 Identity = 53/130 (40.77%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + N G IDD + + D H +VVN+ R+KDLA I +K F Sbjct: 4 KTVLFNKHLESDAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLTDTHYRVVVNSATREKDLAWIAEQVKGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMA (Aminomethyltransferase OS=Prochlorococcus marinus GN=gcvT PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18 Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV------KDDHIYLVVNAGCRDKDLAHIEAH-----MKSFTAKGGDV 632 K T L++ + G +MV FAGW+MPIQ+ I E R+N +FD+SHM S++GK+ L+ LV +D+ + PG TV N +GG IDD ++ + ++ I +V+NAGC D+ I+ H +K AKG V Sbjct: 4 KNTPLYETCLNEGARMVEFAGWNMPIQFSGLINEHNA-VRKNSGIFDISHMGVFSIQGKNPKDALQTLVPSDLHRIGPGEACYTVLLNNDGGIIDDLIVYDLGTNDPNNEECILIVINAGCTQADIDWIKEHLSDKNLKVCNAKGDGV 150
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MOOTA (Aminomethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18 Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 +LKKT L+ HVA G KMV F GW MP+QY SI+E R LFDVSHM +++KG D + ++KL+ D + +GG +DD ++ + LVVNAG DKD A I+ + F + ++S Sbjct: 3 DLKKTPLYGEHVAAGAKMVEFGGWLMPVQY-SSIIEEHQRVRNCAGLFDVSHMGEITIKGPDALALVQKLLTNDADRATGDRVIYSPMCYPDGGVVDDLLVYPRGEGEYLLVVNAGNIDKDFAWIQENASGFRVEVSNIS 141 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |