FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BORA1 (Aminomethyltransferase OS=Bordetella avium (strain 197N) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18 Identity = 53/124 (42.74%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 +LK T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + G D FL LV DVA L PG + N GG IDD +I D +VVNAG +KD+A Sbjct: 4 SLKHTPLAETHLAAGARMVDFGGWEMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNADITGPDATAFLRYLVANDVARLNTPGKALYSCMLNPQGGVIDDLIIYYFAPDSWRVVVNAGTAEKDMA 126
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNPW (Aminomethyltransferase OS=Synechococcus sp. (strain WH7803) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18 Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH-------IYLVVNAGCRDKDLAHIEAHM 602 +L +T LHD V GG+MVPFAGW MP+Q+ + E T RQ LFD+SHM L ++G + L+ LV D+ + PG +V NE+GG DD ++ + + + +V+NA C D A I + Sbjct: 2 DLHRTPLHDLCVTTGGRMVPFAGWEMPVQFSGLVAEHTA-VRQRVGLFDISHMGVLRIEGSNPKDALQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLIVYDLGQTNSDQGEASLIVVINAACAAADTAWISEQL 136
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_GEOSW (Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 LK+T L + G K + F GW +P+Q+ SI E R LFDVSHM +KG D + FL+K++ DV+ L G ++ E+GG++DD +I K D H LVVNA +KD + H+ Sbjct: 2 LKRTPLFAVYERYGAKTIDFGGWELPVQFS-SIKEEHEAVRTRAGLFDVSHMGEFVVKGDDSLAFLQKMMTNDVSKLTDGRVQYSLMCYEDGGTVDDLLIYKKADGHYLLVVNAANIEKDFEWLHGHL 128
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHLCH (Aminomethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18 Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER 656 +KKTAL+ H +G K++ F G+ MP+QY I E R LFDVSHM +KG + FL+ + D+A + G + +GG +DD +I ++ D +L+VNA DKD A ++ H+ F V+ H ER Sbjct: 1 MKKTALYPCHEQSGAKIIDFGGYLMPVQYAGIIAEHKA-VRSAAGLFDVSHMGNFFVKGSRALEFLQFVTTNDLAKVVDGQAQYNLMLYPSGGIVDDLIIYRMSADTFFLIVNASNADKDFAWLQQHIDQFEG----VTLEDHTER 141
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHLTE (Aminomethyltransferase OS=Chlorobium tepidum GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17 Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KKTAL +H A G KM+ F G+ MP+QY I E R+ LFDVSHM ++G + FL+ + D+A + G T+ +GG +DD +I +V D +L+VNA +KD + +H+ F Sbjct: 1 MKKTALSAWHEAAGAKMIDFGGFLMPVQYTGIIAEHKA-VREAAGLFDVSHMGNFYVRGARALEFLQYMTTNDLAKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFFLIVNASNCEKDFDWLSSHIGQF 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACCN (Aminomethyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17 Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 L++T L D + GGK + F GW +P+Q+ SI E R LFDVSHM + + G D + FL+++V DV+ L G T ENGG++DD +I K ++ LV+NA +KD + +H+ Sbjct: 4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNPX (Aminomethyltransferase OS=Synechococcus sp. (strain WH8102) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 L++T LH GG+MVPFAGW MP+Q+ I E R+ +FD+SHM L L+G + L++LV +D+ + PG TV NE+GG DD ++ + + LV+NA C + D A I M+ Sbjct: 3 LQRTPLHQLCQDGGGRMVPFAGWEMPVQFSGLIQEHKA-VREQVGMFDISHMGVLRLEGPNPKDALQQLVPSDLHRIGPGEACYTVLLNESGGIRDDLIVYDCGAVDAERGALVLVINAACAEADTAWIRDQME 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAS1 (Aminomethyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + LKKT L+ V +G K+V F GW+MP+Q+ SI E R LFDVSHM + +KG D ++ L+ D + T NE GG IDD + K++++ LVVNAG +KD + K+F A+ +VS Sbjct: 2 SNELKKTPLYQTFVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRTEMGLFDVSHMGEIIIKGSDASNLVQYLLSNDTDNVTTHKAQYTALCNEQGGIIDDLITYKLEENVYLLVVNAGNTEKDFEWMYEKAKAFDAEVINVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHELP (Aminomethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ KMV F GW MP+ Y I E + RQ+ +FDVSHM + + G + FL KL+ DVA L PG + N G IDD + + D H +VVN+ R+KDLA I +K + Sbjct: 4 KTVLFNKHLEANAKMVDFHGWDMPLNYGSQIEEHHV-VRQDAGMFDVSHMTVVDVTGAEACDFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLSDTHYRIVVNSATREKDLAWITEQVKGY 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CLOBK (Aminomethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 E+LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + + GKD F++ L+ D+ L T NE+GG IDD ++ K ++ +LV+NA +DKD+ I H F + D S Sbjct: 2 EDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEVMVTGKDAGKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAENEFFLVINASNKDKDVKWIMDHKGDFDVEIVDES 141 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |