FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACP2 (Aminomethyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 LK+T L + G K + F GW +P+Q+ SI E R LFDVSHM + +KG+D +PFL++L+ DV+ L G T E+GG++DD ++ + + + LV+NA +KD+ + H Sbjct: 2 LKRTPLFHAYETFGAKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYLLVINASNIEKDVEWLLQH 127
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEDO (Aminomethyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.440e-17 Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFT 614 KT L H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G+D FL KL+ DVA L PG ++N G IDD + + D H +VVN+ R+KDLA I F+ Sbjct: 4 KTVLFHKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGQDARDFLRKLLANDVAKLTVPGKALYGGMLDDNAGVIDDLITYYLSDTHYRVVVNSATREKDLAWIAKQSAPFS 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_GLOVI (Aminomethyltransferase OS=Gloeobacter violaceus GN=gcvT PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.440e-17 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 +LK+T L H+ G ++VPF GW MP+QY E R LFD+SHM +L G D + +++LV +D+A L PG TV NE G IDD + +H ++VN DKD + H++ Sbjct: 3 DLKRTPLCAQHLQLGARLVPFGGWEMPLQYSTLTREHRA-VRTAVGLFDISHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWVVIVNGATNDKDRRWLAEHLQ 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHLP8 (Aminomethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.440e-17 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KKTAL +H G KM+ F G+ MP+QY I E R+ LFDVSHM ++G+ + FL+ + D+ + G T+ +GG +DD +I +V D +L+VNA +KD A + H+ F Sbjct: 1 MKKTALSAWHEGAGAKMIDFGGFLMPVQYSGIIAEHKA-VREAAGLFDVSHMGNFYVRGERALEFLQYVTTNDLGKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFFLIVNASNCEKDFAWLSDHVGGF 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEB9 (Aminomethyltransferase OS=Shewanella baltica (strain OS195) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D + +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEB8 (Aminomethyltransferase OS=Shewanella baltica (strain OS185) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D + +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEB5 (Aminomethyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D + +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEB2 (Aminomethyltransferase OS=Shewanella baltica (strain OS223) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG +EN G IDD + + D + +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_RUBXD (Aminomethyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 L++T L++ H A G ++V FAGW MP+QY E R LFDVSHM ++ +G D L++L+ DV+ L G E+GG++DD VI + + +VVNA R+KDLAH H Sbjct: 9 LRRTPLYEEHRALGARLVDFAGWEMPVQYAGIKAEHEA-VRTRAGLFDVSHMGEVAFRGPDAERALQRLLTRDVSRLGEGQAGYAAVCLESGGTVDD-VIAYRRGEGFLVVVNAANREKDLAHFRRH 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LYSSC (Aminomethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 LK+T L + + G K V F GW +P+Q+ SI + R LFDVSHM + + G D + FL+ L+ DV+ +A G T ENGG +DD + K+ DDH L VNA +KD Sbjct: 5 LKRTPLFEEYAKYGAKTVDFGGWELPVQFS-SIKDEHDAVRNRAGLFDVSHMGEILVTGPDALNFLQNLLSNDVSKIATGQAQYTAMCYENGGVVDDLLTYKLADDHYLLCVNAANIEKD 123 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |