FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_IDILO (Aminomethyltransferase OS=Idiomarina loihiensis GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 56/148 (37.84%), Postives = 77/148 (52.03%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 +T L++ HV G KMV F GW MP+ Y I E R++ +FDVSHM + ++G FL L+ DVA L G T NENGG IDD ++ ++ +VVN+ RD+DLA IE F DV+ D+ +L Sbjct: 4 RTPLYEAHVKAGAKMVDFHGWDMPLNYGSQIEEHHA-VRRDCGVFDVSHMTIVDVEGSQAQAFLRYLLANDVAKLKTEGKAQYTSMLNENGGVIDDLIVYFFSENAYRMVVNSATRDRDLAWIEKVAADF-----DVTTKERDDMGML 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_AERS4 (Aminomethyltransferase OS=Aeromonas salmonicida (strain A449) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++ T LH H+ G KMV F GW MPI Y S +E R + +FDVSHM + L G+ FL+ L+ DVA L PG + N +GG IDD + + D LVVN+ R+KDLA I H F Sbjct: 2 IQTTVLHPKHLEAGAKMVDFHGWEMPINY-GSQLEEHHAVRTDAGMFDVSHMTIVDLTGERVKAFLQHLLANDVAKLTVPGKALYSGMLNPDGGVIDDLITYYLTDTFYRLVVNSATREKDLAWIRHHAIDF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ACIC5 (Aminomethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.186e-17 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 L+KTAL+ H G KMV F GW MP++Y I E + R LFDVSHM + L+G + ++ + + D + LA G + G +DD ++ K D+ +V+NAG R+KD I +H + F Sbjct: 9 LRKTALNAVHRRLGAKMVDFGGWDMPVEYSGLIAEH-MAVRTGVGLFDVSHMGDIQLRGPGSLDAVQHICMNDASKLAVGQAHYSAMLYPQGTFVDDVIVHKFSDNDYLIVINAGTREKDYEWIRSHAQPF 138
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV-----KDDHIYLVVNAGCRDKDLAHIEAHMK 605 +T L++ GG+MVPFAGW MP+Q+ I E R + +FD+SHM L L+G + L++LV +D+ + PG TV N+ GG DD +I + K + LV+NA C D D A I M+ Sbjct: 3 RTPLYELCRTGGGRMVPFAGWEMPVQFSGLIQEHKA-VRNSVGMFDISHMGVLRLEGANPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDLIIYDLGAIDEKRGALVLVINAACADSDTAWIRERME 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEAM (Aminomethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L H+ + KMV F GW+MP+ Y I E R++ +FDVSHM + ++G D FL KL+ D+A L PG N +GG IDD + + D +VVN+ R+KDLA I K F Sbjct: 4 KTVLFSKHLESNAKMVDFHGWNMPLNYGSQIEEHHA-VRRDAGMFDVSHMTVVDVEGADARAFLRKLLANDIAKLTVPGKALYGGMLNHDGGVIDDLITYYLSDTQYRVVVNSATREKDLAWIGEQAKGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHESW (Aminomethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + +EN G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEPC (Aminomethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + +EN G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CELJU (Aminomethyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL--APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 KTAL+D H + GGK+V F GW MP+ Y I E RQ+ +FDVSHM + + G D +L+ L+ DVA L G + NE GG IDD ++ + D +VVN R+KDLA + ++ K Sbjct: 4 KTALYDIHQSMGGKIVDFGGWDMPLHYGSQIDEHH-KVRQHAGMFDVSHMTVVDVTGSDAKAYLQYLLANDVAKLDNLVGKALYSGMLNEQGGVIDDLIVYNM-GDWYRVVVNCSTREKDLAWMSQVANNYQVK 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SYNR3 (Aminomethyltransferase OS=Synechococcus sp. (strain RCC307) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 258 GGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 GG+MVPFAGW M +Q+ + +M RQ +FD+SHM L+L G L+ LV +D+ + PG TV NE GG DD ++ D + +V+NA C D D A I+ ++ Sbjct: 14 GGRMVPFAGWEMAVQF-EGLMAEHRAVRQRCGVFDISHMGVLTLTGSGVKDKLQGLVPSDLQRIGPGEAQYTVLLNEAGGIRDDLIVYDRSDTEVVVVINAACADSDTAWIKQQLE 128
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PSEAE (Aminomethyltransferase OS=Pseudomonas aeruginosa GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17 Identity = 50/131 (38.17%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIY-LVVNAGCRDKDLAHIEAHMKSF 611 +T L++ HVA G KMV F GW MP+ Y + E R++ +FDVSHM + + G+ +L+ L+ DVA L G + NE GG +DD ++ +H Y +VVNA RDKD+A ++A F Sbjct: 4 RTPLYELHVALGAKMVDFGGWDMPLHYGSQVEEHH-QVRRDCGVFDVSHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT--EHGYRVVVNASTRDKDIAWMQAQAAGF 131 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |