FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_EXIS2 (Aminomethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17 Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 LK+T L D +A GKMV FAG+ MP+ + SI E R+ +FDVSHM L + G D + FL++ + D++ +A G V E+GG++DD ++ ++ + LVVNA +KD AH+ ++ Sbjct: 6 LKRTPLFDI-IAPTGKMVDFAGFEMPVLFS-SIKEEHTAVRERVGMFDVSHMGELFVSGSDALAFLQQTLSNDISKIAIGQAQYNVLCQEDGGTVDDLLVYRLDEQDYLLVVNASNIEKDEAHLRQYL 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_TERTT (Aminomethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 52/132 (39.39%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 LK+T L D H GGK+V F GW+MP+ Y I E R +FDVSHM + ++G FL L+ DV L PG T NE+GG IDD ++ + + + LVVN R+KDLA I + +++ Sbjct: 2 LKQTPLFDLHRDMGGKLVDFGGWNMPVNYGSQIEEHHA-VRNGAGMFDVSHMTVVDIQGTGARDFLRYLLANDVDRLKLPGKALYTGMLNESGGVIDDLIVYLMVNGY-RLVVNCATREKDLAWINSQAEAY 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHESR (Aminomethyltransferase OS=Shewanella sp. (strain MR-7) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG ++N G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHESM (Aminomethyltransferase OS=Shewanella sp. (strain MR-4) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG ++N G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHESA (Aminomethyltransferase OS=Shewanella sp. (strain ANA-3) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG ++N G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEON (Aminomethyltransferase OS=Shewanella oneidensis GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG ++N G IDD + + D +VVN+ R+KDLA I + F Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_OCEIH (Aminomethyltransferase OS=Oceanobacillus iheyensis GN=gcvT PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 K+T + + ++G K + F GW +P+Q+ SI R LFDVSHM +S+KG FL+ ++ D++ L PG T+ E+GG++DD ++ K+ D+ LVVNA +KD Sbjct: 5 KRTPIFTEYASHGAKTIDFGGWDLPVQFS-SIKHEHEVTRTKAGLFDVSHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYLLVVNAANTEKD 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACFR (Aminomethyltransferase OS=Bacteroides fragilis GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE+GG +DD ++ + + + LVVNA +KD Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNGVG-VFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASNIEKD 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACFN (Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE+GG +DD ++ + + + LVVNA +KD Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNGVG-VFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASNIEKD 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PELLD (Aminomethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KKTAL+ +H G +++ F GW MP+QY I E R LFDVSHM +KG FL+ + D++ G V NGG +DD +I ++ +++VNAG +KD ++ H + Sbjct: 1 MKKTALYPWHEKAGARIIDFGGWLMPVQYSGIIAEHRA-VRSAAGLFDVSHMGNFYVKGPRAEEFLQHMTTNDLSRAKNGQAQYNVMLYPNGGIVDDLIIYRIDAQTFFIIVNAGNCEKDYQWLQEHAAEY 130 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |