FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THEEB (Aminomethyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 S AE L++T L+ H G + PF W MP+QY SI++ RQ +FD+SHM L L+G+ + L+ LV +++ L PG TV NE GG +DD VI + D + +VNA KD A + ++ Sbjct: 3 SMAEALQRTPLYPLH--QGARFTPFGDWEMPLQYS-SILQEHQAVRQQVGMFDISHMGKLVLRGEGVLGALQTLVPTNLSQLQPGQAKYTVLLNEAGGIVDD-VILYMGDGQVRCIVNAATTAKDWAWFQKYL 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROM1 (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 L +T L+ GGKMVPFA W MP+ + I E R+N +FD+SHM + LKGK+ L+ LV +DV + P TVF ENGG DD +I ++ + LV+NA ++ D+ + +++ Sbjct: 3 LLQTPLYQECKELGGKMVPFANWEMPVSFSGLIEEHNA-VRKNVGMFDISHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTNEESVVLVINAARKESDVEWLSSNL 134
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHLPD (Aminomethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KKTAL+ +H G +++ F G+ MP+QY I E R LFDVSHM + G+ FL+ +V D++ + G + NGG +DD +I ++ +L+VNA +KD A ++ H+ +F Sbjct: 1 MKKTALYHWHEQAGARIIDFGGYLMPVQYSGIIAEHRA-VRSAAGLFDVSHMGNFYVTGERSEAFLQYMVTNDLSKVRDGEAQYNLMLYPNGGVVDDLIIYRLDSKTFFLIVNASNTEKDYAWLQQHIGAF 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_XANCP (Aminomethyltransferase OS=Xanthomonas campestris pv. campestris GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 53/134 (39.55%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 +KT L+D H A G KMV F GW MPI Y I E R++ +FDVSHM + L G FL L+ V L G T N GG IDD ++ ++++ LVVNA RDKDL I F + Sbjct: 3 QKTILNDTHRALGAKMVDFGGWDMPIHYGSQIDEHH-QVRRDAGMFDVSHMTVVDLHGVRVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFFRLVVNAATRDKDLQWIGEQAARFEVR 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_XANC8 (Aminomethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 53/134 (39.55%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 +KT L+D H A G KMV F GW MPI Y I E R++ +FDVSHM + L G FL L+ V L G T N GG IDD ++ ++++ LVVNA RDKDL I F + Sbjct: 3 QKTILNDTHRALGAKMVDFGGWDMPIHYGSQIDEHH-QVRRDAGMFDVSHMTVVDLHGVRVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFFRLVVNAATRDKDLQWIGEQAARFEVR 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SODGM (Aminomethyltransferase OS=Sodalis glossinidius (strain morsitans) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L++ H A+G KMV F GW MP+ Y + E R++ +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ + + LVVN+ RDKD+ I H + + Sbjct: 3 QQTPLYEEHHASGAKMVDFHGWMMPLHYGSQLDEHH-QVRRDVGMFDVSHMTIVDLAGPRTRDFLRHLLANDVAKLTVPGKALYTGMLNASGGVIDDLIVYFLSEIEFRLVVNSETRDKDVEWITRHAEPY 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PSEA6 (Aminomethyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 KT LH H+ +G KMV F GW MPI Y I E R+ +FDVSHM + + G+ +L L+ DVA L G + NE GG +DD ++ + + LVVN+ R KD+ + A + F Sbjct: 4 KTVLHSKHLESGAKMVDFHGWEMPINYGSQIEEHHA-VRRTAGMFDVSHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNYRLVVNSATRQKDMDWLNAQAEGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LEPBL (Aminomethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 52/145 (35.86%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS--WH 641 +K+T L++ H A G KM+PF GW MP+QY I E R+ LFDVSHM + + G K + FLE + VA L+ NENGG +DD I K + + NA + AH+ ++ + K D S WH Sbjct: 4 VKRTPLYETHRALGAKMIPFGGWDMPVQYSGIIAEHNAT-REAAGLFDVSHMGEIFITGEPKIVLDFLELVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSAEKYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWH 147
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 47/123 (38.21%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 LK T LH H A +MV F GW MP+ Y I E R + +FDVSHMC + G+ F E+ + +V L G + N GG IDD ++ +DH +VVNAG +KD+A Sbjct: 4 LKHTPLHATHRALNARMVDFGGWDMPVNYGSQIEEHRA-VRTDAGMFDVSHMCVVDFTGERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHFRVVVNAGTAEKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LEPBJ (Aminomethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 52/145 (35.86%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS--WH 641 +K+T L++ H A G KM+PF GW MP+QY I E R+ LFDVSHM + + G K + FLE + VA L+ NENGG +DD I K + + NA + AH+ ++ + K D S WH Sbjct: 4 VKRTPLYETHRALGAKMIPFGGWDMPVQYSGIIAEHNAT-REAAGLFDVSHMGEIFITGEPKIVLDFLELVTCNSVASLSDFQVQYNAILNENGGLVDDVTIYKFSVEKYMICSNASNYETVTAHLLKYLPASGVKVSDQSPNWH 147 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |