FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NITEU (Aminomethyltransferase OS=Nitrosomonas europaea GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 48/122 (39.34%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDL 581 LK T L+ H A KMV F GW MP+ Y + E + R++ +FDVSHM + + G++ FL LV +V L PG T GG IDD +I + + LVVNAG DKD+ Sbjct: 2 LKTTPLNAAHRAMNAKMVDFGGWDMPLHYGSQLDEHH-SVRRDAGMFDVSHMLTVDIHGENVRQFLRGLVANNVDKLTLPGKALYTCMLTPTGGIIDDLIIYFLSESWFRLVVNAGTADKDI 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NEIMB (Aminomethyltransferase OS=Neisseria meningitidis serogroup B GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 48/125 (38.40%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVI--TKVKDDHIYLVVNAGCRDKDLA 584 LK T H H G K+V FAGW +PI Y I E R + +FDVSHM + G + F KL+ DVA LA G + N+NGG IDD ++ T + +V N R+KD A Sbjct: 4 LKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEA-VRTDAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNEAETQYRIVSNGATREKDTA 127
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NEIMA (Aminomethyltransferase OS=Neisseria meningitidis serogroup A GN=gcvT PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 48/125 (38.40%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVI--TKVKDDHIYLVVNAGCRDKDLA 584 LK T H H G K+V FAGW +PI Y I E R + +FDVSHM + G + F KL+ DVA LA G + N+NGG IDD ++ T + +V N R+KD A Sbjct: 4 LKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEA-VRTDAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNEAETQYRIVSNGATREKDTA 127
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NATPD (Probable aminomethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVV-NAG 563 +L+ L D H G K+ F GW MP+++ DSI R++ FD+SHM + + G D +L DVA LAPG T T+++G +DD+V+ ++ D YL V NAG Sbjct: 2 SLRTPPLFDAHTDAGAKLTEFGGWEMPVEF-DSIRTEHDAVRESAGKFDISHMGEIEVSGPDAAALTNRLTTNDVASLAPGEATYAGITDDDGVLLDDTVVYRLPDGATYLFVPNAG 117
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALTY (Aminomethyltransferase OS=Salmonella typhimurium GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALTI (Aminomethyltransferase OS=Salmonella typhi GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALSV (Aminomethyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALPK (Aminomethyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALPC (Aminomethyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALPB (Aminomethyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |