FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALPA (Aminomethyltransferase OS=Salmonella paratyphi A GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALNS (Aminomethyltransferase OS=Salmonella newport (strain SL254) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALHS (Aminomethyltransferase OS=Salmonella heidelberg (strain SL476) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALCH (Aminomethyltransferase OS=Salmonella choleraesuis GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALA4 (Aminomethyltransferase OS=Salmonella agona (strain SL483) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_HERA2 (Aminomethyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14 Identity = 44/131 (33.59%), Postives = 65/131 (49.62%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +K+T L+ H A G +MV F GW MP+QY I E R+ LFD+SHM + G D F++ + D++ A G + E+GG +DD + D +V NAG +KD A + H + Sbjct: 1 MKQTPLNARHRALGARMVEFGGWDMPVQYAGIIAEHKAT-REGAGLFDISHMARFWVTGPDSERFIQLIDTFDISKTAIGQSDYGIMCYEDGGIVDDIFTYHLGPDEWMVVANAGNAEKDWAWLNQHTAGY 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NITEC (Aminomethyltransferase OS=Nitrosomonas eutropha (strain C91) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 48/122 (39.34%), Postives = 63/122 (51.64%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDL 581 LK T L+ H KMV F GW MP+ Y + E R++ +FDVSHM + L G++ FL LV ++ L PG T N GG IDD +I + + LVVNAG DKD+ Sbjct: 2 LKTTPLNAAHRGMHAKMVDFGGWDMPLHYGSQLDEHHA-VRRDAGMFDVSHMLTVDLHGENVRQFLRGLVANNIDKLTVPGKALYTCMLNPAGGIIDDLIIYFLSESWFRLVVNAGTADKDI 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BURCJ (Aminomethyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ ++ +VVNAG DKD+A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHAA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTADKDIA 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G FL L+ ++ L PG + +E GG IDD ++ +D LVVNA D+ I++ TA G V+ Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRADAGMFDVSHMCVVDLSGIHARAFLRGLLANNIDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTAVGDIEWIQSRN---TATGSGVT 138
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_KLEP7 (Aminomethyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + G FL L+ DVA L PG T + G IDD ++ + +D+ LVVN+ R+KDLA I + + Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRGDAGMFDVSHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPY 132 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |