FC875498

Overview
NameFC875498
Unique NameFC875498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.098e-56
Identity = 121/206 (58.74%), Postives = 140/206 (67.96%), Query Frame = 1
Query:  112 MALVGST---SITPTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKT-----SNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            MAL  S+   S+ P KS  VQ QS    P          TKP   + PISA+H++DS+K P      +  P P   T     + V   +WTV+SW+SKKALQLPEYPN+EEL+SVLKT+++FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMA QFAKPRSD F
Sbjct:    1 MALSSSSTTNSLLPNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNF 206          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 118/190 (62.11%), Postives = 132/190 (69.47%), Query Frame = 1
Query:  139 TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            +P K++F    S    TK    + PISAVH++DS K            PP+A  TT  AP  V KT      +W VDSW+SKKALQLPEYPN+EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMA QFAKPRSD F
Sbjct:   27 SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSF 205          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.816e-55
Identity = 120/212 (56.60%), Postives = 139/212 (65.57%), Query Frame = 1
Query:  112 MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            MAL  +T+     S+    Q+QP ++ P  N             + PI+AVH++DS K            PP+A  TT  AP  V KT      +W VDSW+SKKALQLPEYP++EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMA QFAKPRSD F
Sbjct:    1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNPIVSDKPTKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPDQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSF 205          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.191e-51
Identity = 106/158 (67.09%), Postives = 119/158 (75.32%), Query Frame = 1
Query:  214 ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVK-VGRMAXQFAKPRSDPF 672
            +SAVHAAD AK    V+   KA  P      +   VG  KWTVDSW++KKALQLPEYP++EEL+SVLKT++ FPP+VFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPVVK VGRMA QFAKPRSD F
Sbjct:   38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSF 195          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.720e-50
Identity = 112/196 (57.14%), Postives = 132/196 (67.35%), Query Frame = 1
Query:  112 MALVGSTSITPTKSSFV---------QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSW++KKALQLPEYP+++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMA QFAKPRSDPF
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPTPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPF 178          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.006e-50
Identity = 111/195 (56.92%), Postives = 131/195 (67.18%), Query Frame = 1
Query:  112 MALVGSTSITPTKS---------SFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDP 669
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSW++KKALQLPEYP+++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMA QFAKPRSDP
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPLPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDP 177          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.238e-49
Identity = 108/207 (52.17%), Postives = 130/207 (62.80%), Query Frame = 1
Query:  115 ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPP-----SAVKTTTK------------APEPVLK----TSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            ++ G  ++ P  ++     +  F+T  R     + AVHAA+ +K P     SA KT++             AP PV      T  V P +W VDSW +KKALQLPEYPN  ELE+VLKT++ FPPIVFAG             MG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM  VL FGGQMPV+KVGRMA QFAKPRS+ F
Sbjct:    8 SMAGGAAVVPRSATATTASA--FVTMKR-RATAVRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAF 211          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.610e-48
Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 1
Query:  187 TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            TKP+S ++ ++AVHAA+ A+   +VK +       + +S+ G  KWT +SW+ KKALQLP+YPN  ELESVLKT++ FPPIVFAG             +GKAFLLQGGDCAESFKEFNA NIRDTFR+LLQM +VL FGGQ+PV+KVGRMA QFAKPRSD F
Sbjct:   38 TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAF 191          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.037e-47
Identity = 100/189 (52.91%), Postives = 125/189 (66.14%), Query Frame = 1
Query:  112 MALVGSTSITPTKSSFVQPQSQPFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            M  + ++S   TKS        P+   PR  I   P+ AVH+ D  K   +   + K               W+++SW+SKKALQLP+YP++++++SVL+TL  FPPIVFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMA QFAKPRSDPF
Sbjct:    1 MVTLNASSPLTTKSFL------PYRHAPRRPISFSPVFAVHSTDPKKSTQSASASVK---------------WSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPF 168          
BLAST of FC875498 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 8.877e-31
Identity = 80/161 (49.69%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  190 KPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWESKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAXQFAKPRSDPF 672
            KPRS+    +AVH     K P +  T TK    +L         W  +SW+SKKALQLPEYP++ +L+ VLKT++ FPP+VFAG             MG AFLLQGGDCAESFKE      R  F+        L FGGQ PV+KVGRMA QFAKPR DPF
Sbjct:   36 KPRSSRPISAAVHVTQPPKTPISSATATKRRLSLLNGV------W--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPLYSR-YFQNTASDECRLTFGGQCPVIKVGRMAGQFAKPRLDPF 187          
The following BLAST results are available for this feature:
BLAST of FC875498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
AROF_TOBAC2.098e-5658.74Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU6.750e-5562.11Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC8.816e-5556.60Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ1.191e-5167.09Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC1.720e-5057.14Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU5.006e-5056.92Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ4.238e-4952.17Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH1.610e-4861.11Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH3.037e-4752.91Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO8.877e-3149.69Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionC31404F02EF CTVClemen1 Citrus clementina cDNA clone C31404F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875498 ID=FC875498; Name=FC875498; organism=Citrus clementina; type=EST; length=673bp
GAGGTTCCTCTTTCACGATAAAGAGTTAAAGAGCCTCCGTTTATTTGAAA
AAAAAAAGGGAAAAAAGAAATTCGTTTCATTTACATTTCAACAAAAATAA
ATTAGAACATTATGGCTCTCGTTGGCAGTACTTCAATTACTCCCACAAAA
TCATCCTTCGTTCAGCCACAATCTCAGCCGTTCATCACCAAACCCAGATC
AAATATCCATCCCATCTCCGCCGTCCATGCTGCTGACTCTGCCAAGCCAC
CGTCTGCCGTAAAAACCACAACAAAGGCACCCGAGCCAGTCCTCAAGACC
AGCAATGTGGGTCCCCAAAAATGGACGGTTGACAGCTGGGAATCCAAGAA
GGCTTTGCAGCTGCCGGAGTATCCAAACAAAGAGGAGCTCGAGTCCGTGC
TGAAAACGCTCGACGATTTCCCGCCGATTGTGTTCGCCGGTGAAGCCAGG
AGCTTGGAGGAGCGGCTAGCTGAAGCCGCCATGGGCAAAGCTTTCTTGCT
TCAAGGCGGTGATTGCGCTGAGAGTTTCAAAGAGTTTAATGCTAATAACA
TTCGTGACACTTTCAGAATCCTTCTCCAGATGGGTGTTGTGCTAATGTTC
GGCGGTCAAATGCCCGTTGTTAAGGTGGGAAGAATGGCANGGCAGTTTGC
GAAGCCGAGATCAGATCCGTTTG
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