FC875649
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 7.559e-87 Identity = 163/231 (70.56%), Postives = 184/231 (79.65%), Query Frame = 2 Query: 23 MAMPQRFGRTKNIAKRS-KKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 712 MAM + R++++ KRS KK++EE LY+RLFK G ++V VRQQLNQFLK K VFKWEVGDT+KKLR+R LYYPALKLSE ME+RGMNKTVSDQAIHLDLVAK + I A ENYFVDLPETSK LTYGSLLNCYCKEL+T SSM +NSLMTLY KTG EK+PA+IQE+KA ++MPDSYTYNVWMRALAA NDISG ERVIEEM RDGRVA DWT Sbjct: 1 MAM-RHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWT 230
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34 Identity = 78/223 (34.98%), Postives = 124/223 (55.61%), Query Frame = 2 Query: 44 GRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHL-TYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 709 G ++A + + LY +L + +V + LNQF+ V K ++ K LR + A ++ + MEKR M +VSD AI LDL+ K +G++AAENYF +L ++KNH TYG+L+NCYC EL +S+PFN++M++Y + PEK+P ++ MK I P TY++WM++ ++ND+ G E++I+EM +D W Sbjct: 56 GVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTW 278
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 79/219 (36.07%), Postives = 124/219 (56.62%), Query Frame = 2 Query: 56 NIAKRSKKHLEEALYDRLFKKGS-SDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 709 ++ ++KKH ++Y +L G+ + + LNQF+ V K ++ K LR + AL++ E ME++ + T SD AI L+L+AK +G++AAE YF L ++ KN TYGSLLNCYC E +S+PFN+LM +Y G PEK+PA++ MK SI P TY++W+++ ++ D+ G E+V++EMK +G W Sbjct: 30 SVPTKAKKH--RSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSW 246
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 68/209 (32.54%), Postives = 108/209 (51.67%), Query Frame = 2 Query: 92 ALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRG--MNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 712 A+Y ++ ++ LNQ+ K+ +++ KWE+ +K+LR K AL++ + M RG + SD AI LDL+ KV+GI AE +F+ LPE K+ YGSLLN Y + +PFN +MTLY +K+ A++ EMK I D Y+YN+W+ + ++ + E V ++MK D + +WT Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWT 276
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26 Identity = 65/206 (31.55%), Postives = 110/206 (53.40%), Query Frame = 2 Query: 95 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 709 LY ++ G SV +L +++ K+V E+ + LR RK + AL++S+ M + G+ + ++ A+HLDL+ +V G AE YF +L E KN TYG+LLNCY ++ SS+ +N++M LY G EK+P +++EMK ++ PD+Y+Y + + A A+ D+ + +M+R + DW Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDW 232
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23 Identity = 65/211 (30.81%), Postives = 119/211 (56.40%), Query Frame = 2 Query: 95 LYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW-THSV 721 L ++ K S+ V++R+ + + V K+E+ +++LR K Y AL++ E M + + D A+HLDL++K++G+++AE +F D+P+ + H SLL+ Y + ++ S +P+N ++++Y G EK+P +I+E+K + PD TYN+W+ A A+ ND+ GAE+V + K + ++ DW T+SV Sbjct: 67 LLSLVYTKRSAVVTIRK----WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSV 271
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22 Identity = 65/214 (30.37%), Postives = 108/214 (50.47%), Query Frame = 2 Query: 86 EEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXX-GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTHSV 721 ++ L R+F+ S L +++ ++ E+ + K+LR + Y AL+++E M + +K + +D A +DL++KV GIDAAE YF L SK TY SLL+ Y T F ++ +N +MTLY G EK+P +I+ +K + PD +TYN+W+ + AA +I +++EEM+ D W + Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYI 267
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21 Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = 2 Query: 89 EALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGMNK-TVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 709 + L R+ + G S+ + L+ +L V E+ +K LR + AL++S+ M + +++ + D AI LDL+AKV G+ AE +F +P +N+ YG+LLNCY + + +P+N ++ LY +TG + +++EM+ ++ PD +T N + A + V+D+ G E+ + + D + DW Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDW 245
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 65/226 (28.76%), Postives = 100/226 (44.25%), Query Frame = 2 Query: 50 TKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENME-KRGMNKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKN----HLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 712 T ++A R+ L+E L +K SV L + + S V E+ K+L Y AL++ E ME ++ + +V D A+ LDL+ K G+ E YF L +S + Y LL Y K M + PFN +M LY +G EK+ ++ MK + I + +YN+WM A V+ ++ E V +EM D V W+ Sbjct: 32 TSSVANRNS--LKEIL-----RKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWS 250
BLAST of FC875649 vs. ExPASy Swiss-Prot
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 55/192 (28.65%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 140 RQQLNQFLKSKKRVFKWEVGDTLKKLRDRKLYYPALKLSENMEKRGM-NKTVSDQAIHLDLVAKVQGIDAAENYFVDLPETSKNHLTYGSLLNCYCKELMTXXXXXXXXXXXXXXXGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 709 RQQ NQ S RV +KKLRD AL++SE M K + N D A L L+ V G++ AE +F +P+ ++ Y SLLN Y + T +P+N++M+LY+ + EK+ ++ EMK + + D+ T N ++ +AV D++ E+ + + + + +W Sbjct: 60 RQQGNQVNPSHVRVI-------IKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEW 244 The following BLAST results are available for this feature:
BLAST of FC875649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875649 ID=FC875649; Name=FC875649; organism=Citrus clementina; type=EST; length=723bpback to top |