FC876170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 3 Query: 285 LASPPHNHHRNKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 +AS N N VPV+VMLPL +S + P + L+ L+ AGV+GVMVD WWG++E+ GP Y+W Y L Q+V++ GLKLQ +MSFHQCGGNVGD IP+P WVL+ +PD Sbjct: 1 MASLDKNMLLNYVPVYVMLPLGVVSVNNVFEDPEGLKEQLVQLREAGVDGVMVDVWWGIIEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESDPD 121
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 3 Query: 285 LASPPHNHHRNKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 +A+ N N VPV+VMLPL ++ + P + L+ L++AGV+GVMVD WWG++E+ GP Y+W Y L Q+V++ GLKLQ +MSFHQCGGNVGD TIP+P WVL+ +PD Sbjct: 1 MATSNKNMLLNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMVDVWWGIIEQKGPKEYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVTIPIPQWVLDIGESDPD 121
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 3 Query: 285 LASPPHNHHRNKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 +A+ N N VPV+VMLPL ++ + P + L+ L++AGV+GVM+D WWG++E+ GP Y+W Y L Q+V+K GLKLQ +MSFHQCGGNVGD IPLP WVL+ +PD Sbjct: 1 MATSNKNMLLNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMIDVWWGIIEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKWVLDIGESDPD 121
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.143e-30 Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N V V+VMLPLD +S + K + A L L AGV+GVMVD WWGLVE GP Y+W Y +L ++V+K GLKLQ +MSFHQCGGNVGD+ IP+P WV + +++PD Sbjct: 8 NYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPD 118
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.143e-30 Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N V V+VMLPLD +S + K + A L L AGV+GVMVD WWGLVE GP Y+W Y +L ++V+K GLKLQ +MSFHQCGGNVGD+ IP+P WV + +++PD Sbjct: 8 NYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPD 118
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29 Identity = 58/121 (47.93%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 285 LASPPHNHHRNKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 +A+ N N VPV+VMLPL ++ P + L+ L++AGV+GVMVD WWG++E GP Y+W Y L Q+V++ GL LQ +MSFHQCGGNVGD IP+P WVL+ N D Sbjct: 1 MATSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHD 121
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 125.561 bits (314), Expect = 2.253e-28 Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N V ++VMLPL ++ + L +K+ G +GVMVD WWG++E GP Y+W Y EL Q+VKK GLK+Q +MSFHQCGGNVGD+ IP+P W+L+ KNPD Sbjct: 12 NYVSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKNPD 122
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.554e-28 Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N V V+VMLPLD +S K + A L L AGV+GVM+D WWGLVE GP Y+W Y ++ +V + GLKLQ +MSFHQCGGNVGD IP+P WV + + +PD Sbjct: 8 NYVQVYVMLPLDVVSVDNKFEKGDEIRAQLKKLTEAGVDGVMIDVWWGLVEGKGPKAYDWSAYKQVFDLVHEAGLKLQAIMSFHQCGGNVGDVVNIPIPQWVRDVGATDPD 118
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.560e-28 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKS-AGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N VPV+VMLPL ++ P + L LK AGV+GVMVD WWG++E GP Y+W Y L Q++ + GLK+Q +MSFHQCGGNVGD TIP+P WV + +PD Sbjct: 12 NYVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPD 123
BLAST of FC876170 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25 Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 315 NKVPVFVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKGGPLNYNWEGYAELIQMVKKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEEISKNPD 647 N V V+VMLPLD ++ K A L L AG +GVM+D WWGLVE P Y+W Y ++ ++V++ GLKLQ +MS HQCGGNVGD IP+P WV + NPD Sbjct: 8 NYVQVYVMLPLDVITVDNTFEKEDETRAQLKKLTEAGADGVMIDVWWGLVEGKEPGVYDWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDVGKSNPD 118 The following BLAST results are available for this feature:
BLAST of FC876170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876170 ID=FC876170; Name=FC876170; organism=Citrus clementina; type=EST; length=649bpback to top |