FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_NITHX (60 kDa chaperonin 2 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL2 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 121/215 (56.28%), Postives = 164/215 (76.28%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FGV AR ML+GV +A AVKVT+GPKGRNV++EKS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ +EI QV TISANG+ EIG+ LA AM++VG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + E+++ Sbjct: 3 AKDVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVRNSKKVTSNDEIAQVGTISANGDSEIGKFLANAMKRVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_ECOK1 (60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHEWM (60 kDa chaperonin OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 123/216 (56.94%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A +++LK+ +Q + I QV TISAN + IGE++A AMEKVGKEGVITV +G + NEL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKNLSQECADTNAIAQVGTISANSDETIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHEDO (60 kDa chaperonin OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL Q+I+ EG K+VAAG+N MDL+ GI A+ A +++LK +Q S + I QV TISAN + IGE++A AMEKVGKEGVITV +G + NELE V GM+ RGY+SPYF+ P+T EL++P Sbjct: 3 AKEVKFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVVEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKKLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELEVVEGMQFDRGYLSPYFINKPETGSIELDSP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHEB8 (60 kDa chaperonin OS=Shewanella baltica (strain OS185) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A +++LK+ +Q + + I QVATISAN + IGE++A AMEKVGKEGVITV +G + NEL+ V GM+ RGY+SPYF+ P+T EL++P Sbjct: 3 AKEVVFGNDARVRMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ A +++LK+ +Q + + I QVATISAN + IGE++A AMEKVGKEGVITV +G + NEL+ V GM+ RGY+SPYF+ P+T EL++P Sbjct: 3 AKEVVFGNDARVRMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_RHILW (60 kDa chaperonin OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 123/215 (57.21%), Postives = 164/215 (76.28%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 +K+I FG AR ML+GV +A+AVKVT+GPKGRNVII+KS G P++TKDGV+VA IE DK +++GA +V++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+ DL+++A+ IST EE+ QV TISANG++++G +A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 SKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGNKAVAAGMNPMDLKRGIDLAVADVVKDLQAKAKKISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ECOL5 (60 kDa chaperonin OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A + +LK+ + S + I QV TISAN + +G+L+A AM+KVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T ELE+P Sbjct: 3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACTPL (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae GN=groL PE=3 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++K+ G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+ +LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + + L+ V GM+ RGY+SPYF+ P+ ELENP Sbjct: 3 AKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_ACTPJ (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 122/216 (56.48%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML+GV+ +A+AVKVT+GPKGRNV+++K+ G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+ +LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + + L+ V GM+ RGY+SPYF+ P+ ELENP Sbjct: 3 AKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |