FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 381.719 bits (979), Expect = 2.132e-105 Identity = 197/241 (81.74%), Postives = 214/241 (88.80%), Query Frame = 3 Query: 3 ASSISSPRCKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +SSI S +K V GR++ +RNY AKDI+FG+GARAAMLQGVSEVAEAVKVTMGPKGRNVIIE S G PK+TKDGVTVA SI F+ KAK++GA LVKQVA ATNK AGDGTTCATVLTQAIL EGCKSVAAG+NVMDLR GI MAI AV+SDLKSRA MISTPEEITQVATISANGEREIGEL+ARAMEKVGKEGVITV DGNT+ NELE V GMKLARGYISPYF+TD KTQKCELENP+ Sbjct: 9 SSSIGSSTSRKLVSGRIISSRNYAAKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAGVNVMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFITDEKTQKCELENPI 249
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 8.405e-94 Identity = 173/229 (75.55%), Postives = 198/229 (86.46%), Query Frame = 3 Query: 39 VYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 V R+ +RNY AKDI FGV ARA ML+GV E+A+AVKVTMGPKGRNV+IE+S G PKVTKDGVTVA SIEF+D+ K+VGA+LVKQVA ATN AGDGTTCATVLT+AI TEGCKSVAAG+N MDLR GI MA+DAV+++LK A+MIST EEI QV TISANGEREIGEL+A+AMEKVGKEGVIT+ DGNT+ NELE V GMKL RGYISPYF+T+ KTQKCELE+PL Sbjct: 24 VGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKTQKCELEDPL 252
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.434e-93 Identity = 174/241 (72.20%), Postives = 200/241 (82.99%), Query Frame = 3 Query: 3 ASSISSPRCKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 A S + V R+ +RNY AKDI FGV ARA ML+GV E+A+AVKVTMGPKGRNV+IE+S G PKVTKDGVTVA SIEF+D+ K+VGA+LVKQVA ATN AGDGTTCATVLT+AI TEGCKSVAAG+N MDLR GI MA+DAV+++LK A+MIST EEI QV TISANGEREIGEL+A+AMEKVGKEGVIT+ DGNT+ NELE V GMKL RGYISPYF+T+ K QKCELE+PL Sbjct: 12 ARQAGSSSAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITNSKAQKCELEDPL 252
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 5.448e-93 Identity = 170/234 (72.65%), Postives = 200/234 (85.47%), Query Frame = 3 Query: 24 RCKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +C + R+ RNY AKDI FGV ARA ML+GV ++A+AVKVTMGPKGRNVIIE+S G PKVTKDGVTVA SIEF+D+ K+VGA+LVKQVA ATN AGDGTTCATVLT+AI TEGCKSVAAG+N MDLR GIK+A+D V+++L+SRA+MIST EEI QV TISANG+REIGEL+A+AME VGKEGVIT+ DG T+ NELE V GMK+ RGYISPYF+T+PKTQKCELE+PL Sbjct: 17 KCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPKTQKCELEDPL 250
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.342e-91 Identity = 166/222 (74.77%), Postives = 194/222 (87.39%), Query Frame = 3 Query: 60 NRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +RNY AKD+ FGV AR ML+GV ++A+AVKVTMGPKGRNV+IE+S G PKVTKDGVTVA SIEF+DK K+VGA+LVKQVA ATN AGDGTTCAT+LT+AI TEGCKSVAAG+N MDLR GI MA+D+V+++LKSRA+MIST EEI QV TISANGEREIGEL+A+AMEKVGKEGVIT+ DG T+ NELE V GMKL RGYISPYF+T+ K QKCEL++PL Sbjct: 29 SRNYAAKDVKFGVEARGLMLKGVEDLADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATILTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPL 250
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 335.109 bits (858), Expect = 2.289e-91 Identity = 169/229 (73.80%), Postives = 197/229 (86.03%), Query Frame = 3 Query: 39 VYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 V R+ +RNY AK+I FGV ARA ML+GV ++A+AVKVTMGPKGRNV+IE+S G PKVTKDGVTVA SIEF+DK K+VGA+LVKQVA ATN AGDGTTCATVLT+AI EGCKSVAAG+N MDLR GI MA+DAV+++LKS+A+MIST EEI QV TISANGEREIGEL+A+AMEKVGKEGVIT+ DG T+ NELE V GMKL RGY SPYF+T+ KTQKCEL++PL Sbjct: 21 VSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPL 249
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.484e-90 Identity = 165/221 (74.66%), Postives = 192/221 (86.88%), Query Frame = 3 Query: 63 RNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 RNY AKD+ FGV AR ML+GV ++A+AVKVTMGPKGR V+IE+S G PKVTKDGVTVA SIEF+DK K+VGA+LVKQVA ATN AGDGTTCAT+LT+AI TEGCKSVA+G+N MDLR GI MA+D+V+++LKSRA+MIST EEI QV TISANGEREIGEL+A+AMEKVGKEGVIT+ DG TM NELE V GMKL RGYISPYF+T+ K QKCEL++PL Sbjct: 30 RNYAAKDVKFGVEARGLMLKGVEDLADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATILTKAIFTEGCKSVASGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEVVEGMKLDRGYISPYFITNQKNQKCELDDPL 250
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.536e-82 Identity = 159/236 (67.37%), Postives = 187/236 (79.24%), Query Frame = 3 Query: 27 CKKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAG---ATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 C + R+ RNY AKDI FGV RA ML+GV E+A+AVKVT+ PKGRNVIIE+S G PKVTKDGVTVA SIEF+D+ K+VGA+LVKQVA N+ GDGTTCATVLT+AI TEGCKSVAAG+N MDLR GIK+A+D V++ LKSRA+MIST EEI QV TISANG+RE+ +AME VGKEGVIT+ DG T+ NELE V GMK+ RGYISPYF+T+ K QKCELE+PL Sbjct: 18 CTSQIGSRLSSTRNYAAKDIRFGVEGRALMLRGVEELADAVKVTIPPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANRPTQLNRCLGDGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTKLKSRARMISTSEEIAQVGTISANGDREL-VTDCKAMESVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNQKNQKCELEDPL 252
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: HSP60_SCHPO (Heat shock protein 60, mitochondrial OS=Schizosaccharomyces pombe GN=hsp60 PE=1 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.705e-70 Identity = 134/217 (61.75%), Postives = 172/217 (79.26%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 AKD+ FGV ARA++L GV +A AV VT+GPKGRNV+I++ G+PK+TKDGVTVA S+ +DK +++GA LV+ VA TN+ AGDGTT ATVLT+AI +E ++VAAG N MDLR GI++A+D V+ L++ + I+T EEI+QVATISANG+ IGELLA+AME+VGKEGVITV +G T+ +ELE GMK RGYISPYF+TD K+QK E ENPL Sbjct: 34 AKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKEGRTISDELEVTEGMKFDRGYISPYFITDVKSQKVEFENPL 250
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_DICDI (60 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspA PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.222e-68 Identity = 130/222 (58.56%), Postives = 170/222 (76.58%), Query Frame = 3 Query: 63 RNY-VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 RNY KDI FG RA ML+GV ++A AV+VT+GPKGRNVI+++ G PK+TKDGVTVA IEF D+ ++GA LVK VA + N +GDGTT AT+LT+AI EGCK+VAAG+N MDL GI A++ V+ +LK+ ++ IS+ EEI+QVATISANG++ IG L+A AMEK+GKEGVITV DG T+ +ELE + GMK +G+IS YF+ D K QKCE ++P+ Sbjct: 15 RNYSTGKDIKFGAECRALMLRGVEQLAAAVEVTLGPKGRNVILDQPFGQPKITKDGVTVAKHIEFADRHINLGAQLVKGVASSQNDQSGDGTTTATILTRAIFAEGCKAVAAGMNPMDLWRGINFAVEKVVGELKTISRPISSTEEISQVATISANGDKVIGNLIANAMEKIGKEGVITVQDGKTLKDELEIIEGMKFDQGFISRYFINDAKEQKCEFDDPV 236 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |