FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUSI (60 kDa chaperonin OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=groL PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 122/215 (56.74%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_BRUC2 (60 kDa chaperonin OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=groL PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 122/215 (56.74%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA +E DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A++ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AGGAC (60 kDa chaperonin OS=Aggregatibacter actinomycetemcomitans GN=groL PE=1 SV=3) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 123/216 (56.94%), Postives = 165/216 (76.39%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+++V+++LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T EL+NP Sbjct: 3 AKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVNSVVAELKNLSKPCETSKEIEQVGTISANSDSIVGQLIAQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 123/215 (57.21%), Postives = 164/215 (76.28%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+++L +A+ I+T EE+ QV TISANGE EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKDVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVTEVVAELLGKAKKINTSEEVAQVGTISANGEAEIGKMIADAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 124/215 (57.67%), Postives = 164/215 (76.28%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA LV++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+ DL+++A+ I+T EE+ QV TISANGER+IG +A AM++VG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKEVKFGRSAREKMLKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQLVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQRVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 125/216 (57.87%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F AR ML+GV +A AVKVT+GPKGRNV+I+KS G P++TKDGV+VA IE DK +++GA ++++VA TN AGDGTT ATVL QAI+ EG K++A+G+N MDL+ GI +A+DAV+ +LKS A+ IS EI QV TISANG+ EIG LA AMEKVG EGVITV + T ELE V GM+ RGY+SPYFVT+ + ELE+P Sbjct: 3 AKEVKFQADARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKAIASGMNPMDLKRGIDLAVDAVVKELKSNARKISQNSEIAQVGTISANGDTEIGRYLAEAMEKVGNEGVITVEEAKTSDTELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_RHISN (60 kDa chaperonin 2 OS=Rhizobium sp. (strain NGR234) GN=groL2 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 123/216 (56.94%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ F AR ML+GV +A AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA T+ AGDGTT ATVL QAI+ EG K+VA+G+N MDL+ G+ A+DAV+ +L+ A+ ++ +EI QV TISANG+ EIG LA AMEKVG EGVITV + T V ELE V GM+ RGY+SPYFVT+P + ELE P Sbjct: 3 AKEVRFHTEAREKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGVDKAVDAVVEELRRNARKVTKNDEIAQVGTISANGDTEIGRFLAEAMEKVGNEGVITVEEAKTAVTELEVVEGMQFDRGYLSPYFVTNPDKMRVELEEP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.806e-65 Identity = 123/216 (56.94%), Postives = 162/216 (75.00%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ F AR ML+GV +A AVKVT+GPKGRNV+IEKS G P++TKDGV+VA IE DK +++GA LV++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+DA++ DL ++A+ +++ EI QV TISANG+ ++G+ LA AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+ + + E E+P Sbjct: 3 AKDVKFAGDAREKMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEIELEDKFENLGAQLVREVASKTNDLAGDGTTTATVLAQAIVKEGSKAVAAGMNPMDLKRGIDLAVDAIVKDLAAKAKKVTSNAEIAQVGTISANGDADVGKFLAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNAEKMRVEFEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: HSP60_EMENI (Heat shock protein 60 OS=Emericella nidulans GN=hsp60 PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.277e-65 Identity = 127/244 (52.05%), Postives = 174/244 (71.31%), Query Frame = 3 Query: 6 SSISSPRCKKGVY----GRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +S+ S K+ + G L + + K++ FGV ARA +L+GV +A+AV T+GPKGRNV+IE G+PK+TKDGVTVA +++ +DK +++GA L++ VA TN+ AGDGTT ATVL +AI +E K+VAAG N MDLR GI+ A++A + L+ + I+T EEI QVATISANG+ +G+L++ AME+VGKEGVITV +G T+ +ELE GM+ RGY SPYF+TD K QK E E PL Sbjct: 9 TSVLSAASKRAAFTKPAGLNLQQQRFAHKELKFGVEARAQLLKGVDTLAKAVTSTLGPKGRNVLIESPYGSPKITKDGVTVAKAVQLQDKFENLGARLLQDVASKTNELAGDGTTTATVLARAIFSETVKNVAAGCNPMDLRRGIQAAVEAAVDYLQQNKRDITTGEEIAQVATISANGDTHVGKLISTAMERVGKEGVITVKEGKTLEDELEVTEGMRFDRGYTSPYFITDAKAQKVEFEKPL 252
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHELP (60 kDa chaperonin OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=groL PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.277e-65 Identity = 125/216 (57.87%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A +++LK+ +Q S + I QV TISAN + IGE++A AMEKVGKEGVITV +G + NEL+ V GM+ RGY+SPYF+ P+T ELENP Sbjct: 3 AKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELENP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |