FC876272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: HA22I_ARATH (HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.169e-40 Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 4 EDRVEIDQLRFWCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSARFSNAPAHENQKHNGEKQHAPSAP---PPPEN 447 ++R EI+QLRFWC+YWILVA LTV ER DA SW PMY E KLAFFIYLW PKT+GT +VY+S RPY+S+HE DID +LELR R D+A+ YWQ A Q + +I++++A QS P QK G AP+ P P P++ Sbjct: 29 KNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLAFFIYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQTRILEILQYVAAQSTPRPQPP----QKRGGRANQAPAKPKKAPVPQS 175
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: HA22J_ARATH (HVA22-like protein j OS=Arabidopsis thaliana GN=HVA22J PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 9.111e-39 Identity = 71/156 (45.51%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 4 EDRVEIDQLRFWCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSARFSNAPAHENQKHNGEKQHAPSAPPPPENGFNSPRTP 471 +++V+I++LRFWC+YWIL+A+++ ER D SW P+YGE+K+ FF+YLW PKT+GT VY+++L+PY+++HET+IDR+I+ELRAR WD I+Y+ N A+ Q +++ QS RFS A A++ +A S P +N SPR P Sbjct: 29 KNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVVFFVYLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQSTLIQGFQYVLAQSVRFSAAAANQPPTERNVNMNAQS-PVEMDNDPPSPRAP 183
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: HA22H_ARATH (HVA22-like protein h OS=Arabidopsis thaliana GN=HVA22H PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 4.679e-35 Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 4 EDRVEIDQLRFWCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSA--------RFSNAPAHENQKHNGEKQHAPSAPPPPE 444 +++ E+ QLRFWC+YWILVA LT+ ER DA+ASW P+Y E KLAFFIYLW PKT+GT +VY S +PYV+KHE +IDR ++ELR + DLA+ Y + Q + +I+ F+A QS + + AP E QK K + +A P+ Sbjct: 29 KNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFIYLWFPKTRGTTYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLAVIYCRKAVSYGQTRIVEILHFVALQSTPKPKPKEKKQAAAPEEEEQKQPDLKATSQAASSNPQ 183
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: HA22G_ARATH (Putative HVA22-like protein g OS=Arabidopsis thaliana GN=HVA22G PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.679e-35 Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 7 DRVEIDQLRFWCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSARFSNA 375 ++ EI QL+FWC+YWI+VA LT+ ER DA+ SW PMY E KLAFFIYLW PKT+GT +VY S RPY++KHE +IDR +++++ R D+A+ Y Q Q KFF+I++++ QS S A Sbjct: 19 NKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFFIYLWFPKTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAINQGQTKFFEILQYITEQSTPKSKA 141
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP1_MOUSE (Receptor expression-enhancing protein 1 OS=Mus musculus GN=Reep1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16 Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSA---RFSNAPAHENQKHNGEKQHAPSAPPPPENGFNS 459 W YWI+ A+ T E F D WFP Y ELK+AF +L SP T+G+ +Y+ + P +S E +ID +++ + R +D +++ + L+ ++ GQ A R + + G+ APS PPPP G +S Sbjct: 38 WMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKR--GLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGTGRSS 179
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP1_HUMAN (Receptor expression-enhancing protein 1 OS=Homo sapiens GN=REEP1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.725e-16 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAELSQEKFFDIIKFLAGQSA---RFSNAPAHENQKHNGEKQHAPSAPPPPENG 450 W YWI+ A+ T E F D WFP Y ELK+AF +L SP T+G+ +Y+ + P +S E +ID +++ + R +D +++ + L+ ++ GQ A R + + G+ APS PPPP +G Sbjct: 38 WMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKR--GLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGSG 176
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP4_BOVIN (Receptor expression-enhancing protein 4 OS=Bos taurus GN=REEP4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.669e-14 Identity = 31/84 (36.90%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYY 288 W YWI+ A+ +E F D SWFP Y E+K+AF ++L SP T+G +Y+ + P +S+HE +ID I++ + R ++ + + Sbjct: 38 WMMYWIVFALFMAVETFTDIFISWFPFYYEIKMAFVLWLLSPYTRGASMLYRKFVHPSLSRHEKEIDTYIVQAKERSYETVLSF 121
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP3_HUMAN (Receptor expression-enhancing protein 3 OS=Homo sapiens GN=REEP3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.553e-14 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYY 288 W YWI+ A+ TV+E D +WFP+Y ELK+AF I+L SP T+G +Y+ L P +S E +ID I++ + R ++ + + Sbjct: 38 WMMYWIVFALYTVIETVADQTVAWFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVNF 121
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP3_MOUSE (Receptor expression-enhancing protein 3 OS=Mus musculus GN=Reep3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.947e-14 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYY 288 W YWI+ A+ TV+E D +WFP+Y ELK+AF I+L SP T+G +Y+ L P +S E +ID I++ + R ++ + + Sbjct: 38 WMMYWIVFALYTVIETVADQTLAWFPLYYELKIAFVIWLLSPYTRGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVNF 121
BLAST of FC876272 vs. ExPASy Swiss-Prot
Match: REEP3_DANRE (Receptor expression-enhancing protein 3 OS=Danio rerio GN=reep3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.947e-14 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 37 WCKYWILVAMLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYY 288 W YWI+ A+ TV+E D +WFP+Y E+K+AF I+L SP T+G +Y+ L P +S E +ID I++ + R ++ + + Sbjct: 38 WMMYWIVFALFTVVETVADLTIAWFPLYYEIKIAFVIWLLSPYTRGASVIYRKALHPLLSSKEREIDDYIVQAKERSYETMVNF 121 The following BLAST results are available for this feature:
BLAST of FC876272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876272 ID=FC876272; Name=FC876272; organism=Citrus clementina; type=EST; length=473bpback to top |