FC876785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_SCHPO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe GN=cpd1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSN-KGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFER----TGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 ++ GDL + + + + + + F N++GAF HS+ IGK +G + S K GF+YLL PTPELWTL L HRTQI+Y DI+ + L + G V +R V P G ++TF++H R +A ++F V + RD+ GF D + + D+IFLDL Sbjct: 10 VENGDLAVAWIGRNKLIPLHIEAEKTFHNQYGAFPHSEMIGKRYGEQIASTAKQGFIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEYHATRYQTALQEFREHEMLIDVGGNTHLTHRDVCKDGFLDTEVKV-DAIFLDL 187
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_YARLI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica GN=TRM61 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23 Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSA-FQNRFGAFKHS--DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGL-PDSIFLDL 669 I++GDLV+ + +K + V + F R+GAF H D G GSM +K GF++L+ PTPELWTL L HRTQI+Y D S+++ L++ PG V +R+ G VY+++FHE+R A+++FER +++ + RD+ GF E I + ++FLDL Sbjct: 9 IEDGDLVLGWMTRTAIKPIVVEKKEGLFNTRYGAFPHRNMDKYGAQLGSM---SKQGFIHLIHPTPELWTLSLPHRTQIVYTTDSSYIVQRLKIRPGSTVIESGTGSGSFTHAISRSAGLAGKVYSYEFHEERYNLAKQEFERHQLTNVIPTH-RDVCNDGFDIENIDVNATAVFLDL 182
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_CANGA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida glabrata GN=TRM61 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMV-----FSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGV-RDIQGQGF 624 I+EGDL +++ D +K V + N F R+G+F H D IGKP+GS + + K FV+++ P+PELWTL L HRTQI+Y D S+++ L P V AR+V G +Y+++FH R A E+F+ G+ T+ RD+ GF Sbjct: 12 IQEGDLALIWISRDNIKPVTINANETFNTRYGSFPHKDMIGKPYGSQIAIRTKVAKKFAFVHVMQPSPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPNSRVIEAGTGSGSFSHAFARSV---GQLYSYEFHPVRYEQATEEFKEHGLLDKNTIITHRDVCKDGF 173
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_ASHGO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii GN=TRM61 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22 Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF 624 I EGDLV+V+ +K +++ F R+G+F H D +G+P+GS + SN+ GF+++L PTPELWTL L HRTQI+Y D S+++ L P V AR V G +++++FH R A +F+ G+ VT+ RD+ +GF Sbjct: 11 IAEGDLVLVWISRGNVKQLRIKSGEVFNTRYGSFAHDDIVGRPYGSQIGVRTKGSNRFGFIHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLGCSPQSRVIEAGTGSGSFSHAFARTV---GQLFSYEFHHMRYEQALAEFQEHGLIADGNVTITHRDVCQKGF 173
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_ASPFU (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus fumigatus GN=trm61 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 70/244 (28.69%), Postives = 101/244 (41.39%), Query Frame = 1 Query: 157 GDLVIVYERHD----CMKAVKVCQNSAFQN------RFGAFKHSDWIGKPFGSMVF----------------------------SNK--------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV-------APT------GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLP--------DSIFLDL 669 GDL +++ R D + ++ +N ++ RFG+F HS I +P+GS + SNK GF++LL PTPELWT L HRTQ++Y D S+++ L + PG + RAV AP G V +F+FH QRA RE+ G+ + V V RD+ GF +G P ++IFLDL Sbjct: 15 GDLALLHLRRDQTIPTILKLEDDENQGYKEGKVTNTRFGSFPHSTLIDQPWGSQIVASVVDTGSRGRKNQSSKKRKADDLDTPTSNKDEAQSSPGTPRAAASGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLCVRPGSTIIEAGAGSGSFTHASVRAVFNGYPSEAPAAKKRRLGKVCSFEFHAQRAQRIREEIHDHGLDALVEVTHRDVYEDGF---LLGDPKTGKSPKANAIFLDL 255
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_ASPOR (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae GN=trm61 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 60/204 (29.41%), Postives = 82/204 (40.20%), Query Frame = 1 Query: 235 RFGAFKHSDWIGKPFGSMVFSNK--------------------------------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV--------APT-----GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLP--------DSIFLDL 669 RFG+F H +P+GS + ++K GF++LL PTPELWT L HRTQ++Y D S+++ L PG V RAV PT G V +F+FH QRA R + + G+ V V RD+ GF +G P ++IFLDL Sbjct: 51 RFGSFPHITLCDQPWGSQIIASKVDTGSRGRTQKMKRKADELDSSTQAEDKPSPQTPVAASSGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLRARPGSTVIEAGAGSGSFTHASVRAVFNGYPSDDQPTKKRRLGKVCSFEFHAQRAEKVRVEVNQHGLDGLVEVTHRDVYEDGF---LLGDPKTGKSPKANAIFLDL 251 The following BLAST results are available for this feature:
BLAST of FC876785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876785 ID=FC876785; Name=FC876785; organism=Citrus clementina; type=EST; length=669bpback to top |