FC876785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.687e-37 Identity = 81/181 (44.75%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R++APTGH++T +FH+QRA ARE+F++ VS +VTV +D+ GF + + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF--GVVHVADAVFLDI 182
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.290e-37 Identity = 81/181 (44.75%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R+VAPTGH++T +FH+QRA ARE+F+ +S +VTV +D+ GF + + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF--GVVHVADAVFLDI 182
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVA--DAVFLDI 182
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF + D++FLD+ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGFGVSHVA--DAVFLDI 182
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 73/179 (40.78%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 142 RCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQG-QGFPDEFIGLP-DSIFLDL 669 + IKEGD V++Y D M + + N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+ DIS +I LEL G AR +AP GH++TF+FHE+R AR+DF+ G+ ++TV RD G +GF + I D++FLDL Sbjct: 6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGFLRQDINNDIDAVFLDL 184
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF 624 IKEGDLV+ + D +K + V F R+GAF HSD IGKPFGS + SN+ GF+++L PTPELW++ L HRTQI+Y D S+++ +E P V AR+ GH+++++FHE R A+++F+ G+ + T+ RD+ GF Sbjct: 11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGF 173
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26 Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLP-DSIFLDL 669 I+EGDLV+ Y +K + V + F R+G F+H IG +G + KG GF++LL PTPELWTL L HRTQI+Y D S++I L + PG V AR V +G V+T++FHE R A+++ E + + T+ RD+ GF + + D +FLDL Sbjct: 10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLDN-TTITHRDVCNDGFSIDNESIEGDVVFLDL 184
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.524e-26 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTG-VSSFVTVGVRDIQGQGF 624 IKEGDL +++ D +K V++ F R+G+F H D IGKP+GS + SNK FV++L PTPELWTL L HRTQI+Y D S+++ L P V AR+V GH+++F+FH R A E+F+ G + VT+ RD+ GF Sbjct: 13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGF 174
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25 Identity = 67/176 (38.07%), Postives = 104/176 (59.09%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFIGLPDSIFLDL 669 I+ GD+VI+Y D M A+ + F N++G + H IG+ +GS + S G+V++L PTPELWTL L HRTQILY+ DIS++ M L + G V +R+V P+G V +F++H QR +A ++FE G+++ V + R++ +GF D G+ + +FLDL Sbjct: 14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLTN-VRLQHRNVCKEGFGDA-QGV-EGVFLDL 186
BLAST of FC876785 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.741e-24 Identity = 64/184 (34.78%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF-----PDEFIG----LPDSIFLDL 669 I+EGDLV+ + +K + V + S R+G F+H IG +G + KG GF++LL PTPELWT+ L HRTQI+Y D S++I L + G V AR + G ++T++FHE R A+++ E G+ + + RD+ GF P++F D +FLDL Sbjct: 10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDFKKDDGICGDVVFLDL 193 The following BLAST results are available for this feature:
BLAST of FC876785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876785 ID=FC876785; Name=FC876785; organism=Citrus clementina; type=EST; length=669bpback to top |