FC877995
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIT1_MOUSE (Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23 Identity = 82/293 (27.99%), Postives = 141/293 (48.12%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAP----NTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPAN------SYLLNSMQRNLNWVHAVTANYYKP--SSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAATGPA----LTND-GLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K KNP + LL++G G ++ MV +S+R++F+ S++ R GF GLD W P + + D L + A + EA +S +++ L+LTA + P++ Y ++ + ++L++++ + +++ +T +P G S ++ D + W+++G A KL + +P YG ++ L DNG+GA ATGP T D G++ Y + + + Q V Y W FDDVE+ +AK AY K+K L G VW + D Sbjct: 84 KTKNPKLKTLLAVG-GWTFGTQKFTDMVATASNRQTFVKSALSFLRTQGFDGLDLDWEFPGGRGSPTVDKERFTALIQDLAKAFQE-EAQSSGKER--LLLTA----AVPSDRGLVDAGYEVDKIAQSLDFINLMAYDFHSSLEKTTGHNSPLYKRQGESGAAAEQNVDAAVTLWLQKGTPASKLILGMPTYGRSFTLASSSDNGVGAPATGPGAPGPYTKDKGVLAYYEACSWKERHRIEDQ-------KVPYAFQDNQWVSFDDVESFKAKAAYLKQKGLGGAMVWVLDLD 361
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIA_RAT (Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22 Identity = 78/287 (27.18%), Postives = 129/287 (44.95%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTS----TDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPANSYLLNSMQRNLNWVHAVTANYYKP--SSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAAT-----GPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 KN+N + LL+IG G + + +++MV S +R++FI S I+ R YGF GLD W P + D +L E R A + EAI S+R + + S Y + + + L+++H +T + + T +P L + + D V+ W + G A+KL + P YG+ + L P D GIGA + GP G Y I ++N A +++ V Y G W G+D++++ K + K+ G +W + D Sbjct: 84 KNRNSKLKTLLAIG-GWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKELR-EAFEQEAIESNRPRLMVTAAVAAGISNIQAGYEIPELSQYLDFIHVMTYDLHGSWDGYTGENSPLYKLPTETGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPEYGHTYILSNPSDTGIGAPTSGNGPAGPYTRQAGFWAYYEICTFLRNGATQ---DWDAPQEVPYAYKGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIT1_HUMAN (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.183e-22 Identity = 75/291 (25.77%), Postives = 132/291 (45.36%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYS---PPANSYL-----LNSMQRNLNWVHAVTANYYKP--SSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAAT-----GPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K NP + LL+IG G + ++ MV +++R++F++S+IR R Y F GLD W P + D+ R + N+ +Q++ R S P +Y+ ++ + +NL++V+ + +++ T +P S + + D ++ W+++G A KL + +P YG ++ L D +GA AT GP G++ Y + + +Q V Y W GFDDVE+ + K++Y K+K L G VW + D Sbjct: 84 KKMNPKLKTLLAIG-GWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLD 363
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIA_MOUSE (Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22 Identity = 80/288 (27.78%), Postives = 135/288 (46.88%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTS----TDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPANSYLLNSMQRNLNWVHAVTANYYKPSSTNFTAPPAALHG--SSSGGFAK-STDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAAT-----GPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 KN+N + LL+IG G + + +++MV S +R++FI S I+ R YGF GLD W P + D +L E R A + EAI S+R + + S Y + + + L+++H +T + + S +T + L+ + +G A + D V+ W G A+KL + P YG+ + L P DNGIGA + GP G Y I +++ A V ++++ V Y W G+D++++ K + K+ G +W + D Sbjct: 84 KNRNSKLKTLLAIG-GWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKEMR-EAFEQEAIESNRPRLMVTAAVAGGISNIQAGYEIPELSKYLDFIHVMTYDLHG-SWEGYTGENSPLYKYPTETGSNAYLNVDYVMNYWKNNGAPAEKLIVGFPEYGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEICTFLRSGATEV---WDASQEVPYAYKANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIA_HUMAN (Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.377e-21 Identity = 81/289 (28.03%), Postives = 134/289 (46.37%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTS----TDMFNIGLLFDEWRIA-ATKLEAINSSRQQSPLILTARFRYSPPANSYLLNSMQRNLNWVHAVTANYYKPSSTNFTAPPAALHG--SSSGGFAK-STDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAAT-----GPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 KNKN + LL+IG G + + +++MV +R++FI S I+ R Y F GLDF W P + D +L E R A + + IN R + A S + Y + + + L+++H +T + + S +T + L+ + +G A + D V+ W + G A+KL + P YG+ + L P + GIGA + GP G+ Y I +KN A +++ V Y G VW G+D++++ K + K + G VW + D Sbjct: 84 KNKNSQLKTLLAIG-GWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGI--SNIQSGYEIPQLSQYLDYIHVMTYDLHG-SWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKNGATQ---GWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIA_BOVIN (Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.564e-20 Identity = 77/287 (26.83%), Postives = 128/287 (44.60%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAP----NTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPANSYLLNSMQRNLNWVHAVTANYYK--PSSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAAT-----GPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K KN + +LL+IG G + + +++MV +RK+FI S I+ YGF GLDF W P + S D +L E R A + EA +++ + + S Y + + + L+++H +T +++ T +P + + + + W + G A+KL + P YG+ + L +NGIGA + GP G Y I +K+ A ++ + V Y GT W G+D+V + R K + KE G VW + D Sbjct: 84 KKKNSQLKILLAIG-GWNFGTAPFTAMVATPENRKTFISSVIKFLHQYGFDGLDFDWEYPGFRGSPSQDKHLFTVLVQETR-EAFEQEAKQTNKPRLLVTAAVAAGISNIQAGYEIPQLSQYLDFIHVMTYDFHGSWEGYTGENSPLYKYPTDTGSNTYLNVEYAMNYWKKNGAPAEKLIIGFPAYGHNFILRDASNNGIGAPTSGAGPAGPYTREAGFWAYYEICAFLKDGATEA---WDDSQNVPYAYKGTEWVGYDNVNSFRIKAQWLKENNFGGAMVWAIDLD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CH3L4_MOUSE (Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.945e-20 Identity = 78/290 (26.90%), Postives = 133/290 (45.86%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNT----STDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFR--YSPPANSYLLNSMQRNLNWVHAVTANYYKPSSTNFTAPPAALHGS--SSGGFAK-STDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIG-----AAATGPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K++N + LL+IG G + +SSMV +R++FI S IR R Y F GL+ W P + D +L E R A + +N + L+LT+ + Y + + ++L+++ +T + + P + +T + L+ S G A + D ++ W + G +++KL + P YG+ + L P NGIG A G GL+ Y I + A + +++T V Y G W G+D+V + + K + K+ L G VW + D Sbjct: 84 KDRNTELKTLLAIG-GWKFGPAPFSSMVSTPQNRQTFIKSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEEESTLNHIPR---LLLTSTGAGFIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKN-GYTGENSPLYKSPYDIGKSADLNVDSIITYWKDHGAASEKLIVGFPAYGHTFILSDPSKNGIGDPTVSAGPPGKYTNEQGLLAYFEICTFLNEGATEI---FDATQEVPYAYLGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CH3L2_HUMAN (Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.945e-20 Identity = 74/286 (25.87%), Postives = 132/286 (46.15%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPA--NSYLLNSMQRNLNWVHAVTANYY----KPSSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDN----GIGAAATGPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K KNP + +LLSIG G + MV +S+ R FI+S I R + F GLD +W P+ + + +L E A K + S++++ L+LTA NSY + + ++L++++ ++ +++ KP T +P + + + + WI +G+ ++K+ M +P YG+++ L E G A GP + G + Y I +K ++ V Y G W G+DDV+++ K+ + K L G +W + D Sbjct: 89 KTKNPKLKILLSIG-GYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENT-HFTVLIHELAEAFQK-DFTKSTKER--LLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKG----AKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CH3L1_HUMAN (Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19 Identity = 77/281 (27.40%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPA--NSYLLNSMQRNLNWVHAVTANYYKP--SSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRLVKPEDNGIGAAATGPALTNDGLVTYRTIKNH-IKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 KN+NP++ LLS+G G + +S + N+ R++FI S R +GF GLD AW P D + L E + K EA +Q L+L+A +SY + + ++L+++ +T +++ +T +P +S +TD + + G A KL M +P +G ++ L E G+GA +GP + T+ + I ++ V V Y + G W G+DD E+V++K+ Y K+++L G VW + D Sbjct: 84 KNRNPNLKTLLSVG-GWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKQHFTTLIKEMKAEFIK-EAQPGKKQ---LLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSE-TGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLD 357
BLAST of FC877995 vs. ExPASy Swiss-Prot
Match: CHIT_CAEEL (Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.324e-19 Identity = 76/285 (26.67%), Postives = 132/285 (46.32%), Query Frame = 1 Query: 1 KNKNPSITMLLSIGEGRHTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLEAINSSRQQSPLILTARFRYSPPA--NSYLLNSMQRNLNWVHAVTANYYK--PSSTNFTAPPAALHGSSSGGFAKSTDQVLKAWIERGLSADKLAMSLPFYGYAWRL-----VKPEDNGIGAAATGPALTNDGLVTYRTIKNHIKNYAPNVQVMYNSTYVVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYVWRVPFD 828 K + + LLS G G +++ M +S+ RK FIDS+I R +GF G+D W P+ +TDM N L E + AA + EA ++ + + L++TA P Y + ++ N +++ ++ +++ S F +P A + + D + W ++G+ +K+ + +P YG W L + P +G A T + G+ Y + N A ++S V Y G W+ +DD E+ K+AY K + G +VW + FD Sbjct: 123 KVTDTQLKTLLSFG-GWSFGTALFQGMAASSASRKVFIDSAITFVRTWGFDGIDIDWEYPSGATDMANYVALVKELK-AACESEAGSTGKDR--LLVTAAVAAGPATIDAGYDIPNLAPNFDFILLMSYDFFGAWASLVGFNSPLYATTELPAEWNGWNVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAINPGTSGSPAKIT-QYVQEAGVGAYFEFCEMLANGATR---YWDSQSQVPYLVQGNQWWSYDDEESFANKMAYVKREGYGGAFVWTLDFD 399 The following BLAST results are available for this feature:
BLAST of FC877995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877995 ID=FC877995; Name=FC877995; organism=Citrus clementina; type=EST; length=830bpback to top |