FC878296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.303e-53 Identity = 121/281 (43.06%), Postives = 172/281 (61.21%), Query Frame = 1 Query: 94 IFSLNFAHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLS-SFNKLAKLALVDCKDLYDDTVNHLNRSMSS----SNPIDSVTWLSAAIANQETCKNGFTDFNL-HSHLQSLPFM-SGNFSKLLSNSLAITKSTVSSSSIPYAYKRNG---------------GRRLLV---NGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 + S++ + ITSC QTPYP +C+H+ + + L L+ F+F DL + T+DQA+ H+L+S++ S +K A AL DC +LY+DT++ LN S S S+P D T LSAAIANQ+TC+NGF DF L S+ + P N +K +SNSLA+TK+ + ++ Y G RRLL+ FP+W +DR+LL+ S KAD+VVA+DGSG+Y +I + V AA KL ++R+VIYVK GVYRENV IK+S+KN+M Sbjct: 24 VVSISHLNAHFITSCKQTPYPSVCDHHMSNSPLKTLDDQTDGFTFHDLVVSSTMDQAVQLHRLVSSLKQHHSLHKHATSALFDCLELYEDTIDQLNHSRRSYGQYSSPHDRQTSLSAAIANQDTCRNGFRDFKLTSSYSKYFPVQFHRNLTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVM 304
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.298e-38 Identity = 101/276 (36.59%), Postives = 161/276 (58.33%), Query Frame = 1 Query: 70 IQLFIHFLIFSLN-----FAHGELITSCSQTPYPEICNHY-TATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSS---NPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPY---AYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 I + + ++FSL+ ++ E+ + C +TP P+ C ++ T +++++ D F ++L++ +++A A T+ N+ K A DC++LY+ TV LN++ +SS +D TWLS A+ N ETC+ D + ++ LP +S N +KL+SN+L++ K +PY +YK +GFPTWV DR+LLQ++ P+A++VVAQDGSGN KTI E VAAA + GG R VIY+K G Y EN+E+K +KN+M Sbjct: 5 ILITVSLVLFSLSHTSFGYSPEEVKSWCGKTPNPQPCEYFLTQKTDVTSIKQDT---DFYKISLQLALERATTAQSRTYTLGSKCRNEREKAAWEDCRELYELTVLKLNQTSNSSPGCTKVDKQTWLSTALTNLETCRASLEDLGVPEYV--LPLLSNNVTKLISNTLSLNK-------VPYNEPSYK---------DGFPTWVKPGDRKLLQTT---PRANIVVAQDGSGNVKTIQEAVAAASRAGG--SRYVIYIKAGTYNENIEVK--LKNIM 252
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.490e-37 Identity = 101/245 (41.22%), Postives = 143/245 (58.37%), Query Frame = 1 Query: 136 CSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSS---NPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 CSQTP P+ C ++ N SN E +++ F +++K+ +D+AI A T+ + K A DC LYD TV+ +N +M + + +D+ TWLS A+ N +TC+ GF + + + LP MS N S LL N+LAI K +P+ Y +GFP+WV DR+LLQSS PK + VVA+DGSGN+KTI E + AA GS R VIYVK+GVY EN+EI++ KN+M Sbjct: 34 CSQTPNPKPCEYFLTHN--SNNEPIKSESEFLKISMKLVLDRAILAKTHAFTLGPKCRDTREKAAWEDCIKLYDLTVSKINETMDPNVKCSKLDAQTWLSTALTNLDTCRAGFLELGVTDIV--LPLMSNNVSNLLCNTLAINK-------VPFNYTPPEK-----DGFPSWVKPGDRKLLQSST--PKDNAVVAKDGSGNFKTIKEAIDAA----SGSGRFVIYVKQGVYSENLEIRK--KNVM 254
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.214e-32 Identity = 95/270 (35.19%), Postives = 155/270 (57.41%), Query Frame = 1 Query: 115 HGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAH----KLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMS-----------SSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQ-SLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLL-----VNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 H L +SCS T YP++C A ++ ++ +Q +++L +T H + KL+ +L+ K K+AL DC + D+T++ L++++ S + D T +SAA+ NQ TC +GF+ + + H++ +L + K+ SN+LA+ K+ + + + + R+L+ V+G+P W+S DRRLLQSS V P +VVVA DGSGN+KT++ VAAA + GG+KR +I +K GVYRENVE+ + KN+M Sbjct: 66 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVT-SQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLT---KREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMM--IMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTP--NVVVAADGSGNFKTVAASVAAAPQ--GGTKRYIIRIKAGVYRENVEVTKKHKNIM 325
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.160e-32 Identity = 91/253 (35.97%), Postives = 137/253 (54.15%), Query Frame = 1 Query: 136 CSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLI--STMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNP--------IDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGN-FSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 C +TPYP C Y + S L FR L ++ +D+A+ A + S+ + + F K A LA DC +LY DTV LNR++ + D+ TWLS A+ N ETC+ G +D N+ + P +S S L+SN LA+ + +++ +N GFPTWVS +RRLLQ V +A++VVA+DGSG++KT+ + A + S R VIYVKRG+Y+EN+ ++ + N+M Sbjct: 42 CDKTPYPYPCKRYFIKH--SGFRLPTQISEFRVLLVEAAMDRAVSAWDKLTNSSKNCTDFKKQAVLA--DCINLYGDTVMQLNRTLQGVSSKTGRRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDF--TTPIVSNTKISHLISNCLAVNGALLTAG-------KNDSTTGDSKGFPTWVSRKERRLLQLQSV--RANLVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIM 279
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.221e-31 Identity = 92/289 (31.83%), Postives = 149/289 (51.56%), Query Frame = 1 Query: 52 MDKLVLIQLFIHFLIFSLNFAHGELITS-------CSQTPYPEICNHYTATNFLSNLELDQTQFS-FRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNP----------IDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGN-FSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 M KL + LF+H ++ L H + C +TPYP+ C Y + N TQ S FR + ++ +D+AI A ++ + + + L DC DLY DT+ LNR++ +P D+ TWLS A+ N ETC+ G +D N+ + P +S S L+SN LA+ + +++ + G GFPTW+S D+RLL++ +A++VVA+DGSG++ T+ + A + S R VIYVKRG+Y+EN+ ++ + ++M Sbjct: 5 MQKLSI--LFLHLILLVLLCVHPLTTVADRNSTDWCDKTPYPDPCKCYFKNH---NGFQQPTQLSEFRVMLVEAAMDRAISARAELTNSGKNCTDSKKQAVLADCIDLYGDTIMQLNRTLHGVSPKAGAAKSCTDFDAQTWLSTALTNTETCRRGSSDLNVTDFIT--PIVSNTKISHLISNCLAVNGALLTAGN-------KGNTTANQKGFPTWLSRKDKRLLRAV----RANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIM 275
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.221e-31 Identity = 95/270 (35.19%), Postives = 153/270 (56.67%), Query Frame = 1 Query: 115 HGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAH----KLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMS-----------SSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQ-SLPFMSGNFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLL-----VNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 H L +SCS T YP++C A ++ ++ +Q +++L +T H + KL+ +L+ K K+AL DC + D+T++ L++++ S + D T +SAA+ NQ TC +GF+ + + H++ +L + K+ SN+LA+ K+ + + + + R+L V+G+P W+S DRRLLQSS V P A VVA DGSGN+KT++ VAAA + GG+KR +I +K GVYRENVE+ + KN+M Sbjct: 66 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVT-SQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLT---KREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMM--IMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNA--VVAADGSGNFKTVAAAVAAAPQ--GGTKRYIIRIKAGVYRENVEVTKKHKNIM 325
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.753e-30 Identity = 87/262 (33.21%), Postives = 133/262 (50.76%), Query Frame = 1 Query: 118 GELITSCSQTPYPEICNHYTATNFLSNLELDQTQF--SFRDLNLKVTIDQAIHAHKLISTMDLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSSSNP----------IDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSG-NFSKLLSNSLAITKSTVSSSSIPYAYKRNGGRRLLVNGFPTWVSAADRRLLQSSGVGPKA-DVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 G++ C++TP+ E CN+Y + +N+ L +F F + +KV +DQA+ H S N K A DC +L+ +TV LNR++ NP D+ TWLS A N ETC++G D N+ + +P +S N S L+ N LA+ + FP+WVS +RRLL S+ + + +VVAQD SG++++I + A + S R VIYVK+GVYREN+++ N+M Sbjct: 82 GDMTWWCNKTPHAETCNYYFRKSSQNNINLRPPRFRSEFLRMLVKVALDQAVITHSQTVKFGPSCTNNQRKAAWSDCVNLFQNTVAQLNRTLKGLNPAASSDVKCTDFDAQTWLSTAQTNIETCRSGSEDLNVSDFV--MPVISNKNLSDLIGNCLAVNGVLMKQHDHTTTANHK-------EYFPSWVSRHERRLLVSASLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKS-RFVIYVKKGVYRENIDVGNDNHNIM 333
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.070e-27 Identity = 92/287 (32.06%), Postives = 138/287 (48.08%), Query Frame = 1 Query: 112 AHGELITSCSQTPYPEICNHYTATNFLSNLELDQTQFSFRDLNLKVTIDQAIHAHKLISTM--DLSSFNKLAKLALVDCKDLYDDTVNHLNRSMSS-----------SNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSGNF--SKLLSNSLAITKSTVSSSSIPYAYKRN----------------------GGRRLLVNGFPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 +H L +SCS T YPE+C T +EL +Q + ++ +TI H + + + K AL DC + D+T++ L+ ++ + D T +S+AI NQETC +GF+ + ++ + G + SN+LA+ K+ + + K G L G+PTW+SA DRRLLQ SGV KAD VA DGSG +KT++ VAAA + +KR VI++K GVYRENVE+ + KN+M Sbjct: 55 SHAVLRSSCSSTRYPELCISAVVT--AGGVELT-SQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKA-LLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGV--KADATVAADGSGTFKTVAAAVAAAPE--NSNKRYVIHIKAGVYRENVEVAKKKKNIM 333
BLAST of FC878296 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27 Identity = 92/270 (34.07%), Postives = 142/270 (52.59%), Query Frame = 1 Query: 112 AHGELITSCSQTPYPEICNHYTATNFLSNLELDQT-QFSFRDLNLKVTIDQAIHAHKLISTM--DLSSFNKLAKLALVDCKDLYDDTVNHL-----------NRSMSSSNPIDSVTWLSAAIANQETCKNGFTDFNLHSHLQSLPFMSG--NFSKLLSNSLAIT---KSTVSSSSIPYAYKRNGGRRLLVNG-FPTWVSAADRRLLQSSGVGPKADVVVAQDGSGNYKTISEGVAAAVKLGGGSKRVVIYVKRGVYRENVEIKRSMKNLM 861 AH + ++CS T +PE+C Y+A +S+ T Q +L+L +T+ + + + K+AL DC + D+T++ L N+ + D T +S+AI NQETC +GF+ ++ + + G + K+ SN+LA+ T ++ + + N + + NG +P W+SA DRRLLQSS V P DVVVA DGSG+YKT+SE V A + SKR VI +K GVYRENV++ + N+M Sbjct: 62 AHAIVKSACSNTLHPELC--YSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKV-LLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTP--DVVVAADGSGDYKTVSEAVRKAPEKS--SKRYVIRIKAGVYRENVDVPKKKTNIM 324 The following BLAST results are available for this feature:
BLAST of FC878296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878296 ID=FC878296; Name=FC878296; organism=Citrus clementina; type=EST; length=862bpback to top |