FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 407 L QKKAHLMEIQVNGGSVA KV++A FEK + I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T+FD Sbjct: 171 LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFD 299
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43 Identity = 76/121 (62.81%), Postives = 102/121 (84.30%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 K+ +QKKAH+ME+Q+NGG+VA+KV +A EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ Sbjct: 169 KLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGR 289
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 83/135 (61.48%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 21 KQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFD 407 +QKKAH+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G ++A TE+D Sbjct: 174 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYD 308
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43 Identity = 76/121 (62.81%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+ Sbjct: 169 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGR 289
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39 Identity = 77/133 (57.89%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 407 +KGL KKAH+ EIQVNGGS+++KV++A G EK+I I VF +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G S + TEFD Sbjct: 164 IKGLGLKKAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---NIKTEFD 293
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PIG (60S ribosomal protein L3 (Fragment) OS=Sus scrofa GN=RPL3 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35 Identity = 64/86 (74.42%), Postives = 78/86 (90.70%), Query Frame = 3 Query: 111 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 ++P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +F+VARAGQ GYHHRTE+NKKIYK+G+ Sbjct: 1 RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQ 86
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +KK +ME V G S+ +K ++ K+I + + Q+ E++DI+ VTKGKG +G V RWGV K +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ Sbjct: 172 KKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGE 286
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRHO (50S ribosomal protein L3P OS=Pyrococcus horikoshii GN=rpl3p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24 Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +KK +ME + G SV +K ++ K+I + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ Sbjct: 175 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 289
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24 Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 407 +KK +ME + G SV +K ++ K++ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + TE + Sbjct: 177 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEIE 304
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24 Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +KK +ME + G SV +K ++ K++ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ Sbjct: 174 KKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 288 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |