FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRKO (50S ribosomal protein L3P OS=Pyrococcus kodakaraensis GN=rpl3p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 GLK KK +ME + G V K D+A K++ V + E++D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ Sbjct: 155 GLK-KKPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 47/115 (40.87%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +K + +I + G V +K+++A K++ I+ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ TV GQ GYH RTE NK I K+G+ Sbjct: 147 KKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGE 261
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_UNCMA (50S ribosomal protein L3P OS=Uncultured methanogenic archaeon RC-I GN=rpl3p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 ++ G+ +K LME ++ GG +A++ +FA K + I VF E++D+ +TKG G +G V RWG+ RK R +K V +G W+P R+ + V + GQ GYH RTE NK+I K+G ++E Sbjct: 151 EVSGIPKKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEE 277
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THEGJ (50S ribosomal protein L3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.606e-20 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +KK +ME + G V K ++A K+I V + E++D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ Sbjct: 157 KKKPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_STAMF (50S ribosomal protein L3P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20 Identity = 50/122 (40.98%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLG 365 + G+ +KK ++EI++ GG++++++D+A + +D VF++ + IDIIGVTKGKG++GV+ R+GV LPR K +G RK IG+ P + + + GQ G+H RTE NK+I K+G Sbjct: 210 LSGIGKKKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG 328
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METB6 (50S ribosomal protein L3P OS=Methanoregula boonei (strain 6A8) GN=rpl3p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20 Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 M G+ +K LMEI+V GG +A++ ++A+G K+I + V + DI +T GKG +G V RWGVT RK G R V +G W+P V + V ++GQ GY RTE NK+I K+G+ E Sbjct: 152 MSGVPKKVPDLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVTLRKRKHSVGGKERHVGTLGPWNPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAE 277
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THEON (50S ribosomal protein L3P OS=Thermococcus onnurineus (strain NA1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20 Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 +KK +ME + G V K D+A K++ V + E++D+I VTKGKG +G V RWG+ K R R V +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ Sbjct: 157 KKKPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKIQFHKAQRAGKGRHVGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRAE (50S ribosomal protein L3P OS=Pyrobaculum aerophilum GN=rpl3p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + G+ +K L+EI + G SV ++++FA K + VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA V FT R GQ G+H RTE NK++ K+G+ E Sbjct: 153 LSGIGKKTPELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRIL (50S ribosomal protein L3P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl3p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + G+ +K L+EI + G SV +++ FA K + VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA V FT R GQ G+H RTE NK+I K+G E Sbjct: 157 LSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRIIKIGDNGAE 282
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PYRCJ (50S ribosomal protein L3P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 ++ G+ +K ++EI V G S+ ++++FA K + VF +++D+I VTKGKGY+GVV R+GVT LPR K +G R+ IG PA + FT R GQ G+H RTE NK+I K+G E Sbjct: 152 RLSGIGKKTPEVLEIPVGGVPSIDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRILKIGDNGAE 278 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |