FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THEAC (50S ribosomal protein L3P OS=Thermoplasma acidophilum GN=rpl3p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 377 + + G+ KK + E+++ GG SV +++++A KQI + + +D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ RT N ++ K G + Sbjct: 142 KDVPGIPSKKPEIFELRIGGGNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEE 267
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METPE (50S ribosomal protein L3P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl3p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 + G+ +K LME+ + GG++ QKV+FA ++ + V E D+ +T GKG +G V RWG+ RK RG +K + +G W+P V + V + GQ GY RT+ NK+I K+G+ Sbjct: 152 LTGVPKKVPELMEVCIGGGTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRKRKHSRGGKKRHIGNLGPWNPHHVRWQVPQMGQMGYQQRTDFNKRILKIGE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METBU (50S ribosomal protein L3P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl3p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18 Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 392 + G+ +K +ME V+G V K ++A + I VF +++D+ +T G G +G V RWG+ + K R LR+V +G W PA VS+ V +AGQ GYH RT+ NK+I K+ E + A Sbjct: 152 LTGVPKKVPDVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVGTLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVNPA 281
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THEVO (50S ribosomal protein L3P OS=Thermoplasma volcanium GN=rpl3p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 368 + + G+ KK + E+++ GG SV ++ ++A K I + + + +D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY RT N ++ K K Sbjct: 142 KDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK 264
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_AERPE (50S ribosomal protein L3P OS=Aeropyrum pernix GN=rpl3p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNGGSVAQKV-DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSF-TVARAGQNGYHHRTEMNKKI 353 GL +KK L+EI+V G S K+ D+A I ++ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R+ IGA R +F +AGQ G+H RTE NK+I Sbjct: 157 GLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRI 270
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_HALWD (50S ribosomal protein L3P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl3p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 377 M+ + +K +ME +V GG++ +V+F + I +F+ E +D GVTKGKG +G V R+GV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G + Sbjct: 152 MRNIPKKTPDVMETRVGGGTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDE 278
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_HALSA (50S ribosomal protein L3P OS=Halobacterium salinarium GN=rpl3p PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQ--IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 377 G+ +K +ME +V GG++A +++FA E VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + + Sbjct: 151 GVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDE 275
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_HALS3 (50S ribosomal protein L3P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQ--IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 377 G+ +K +ME +V GG++A +++FA E VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + + Sbjct: 151 GVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDE 275
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_PICTO (50S ribosomal protein L3P OS=Picrophilus torridus GN=rpl3p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 359 + G+ K + EI++ G ++ ++ +A I + +D+I VTKGKG++GVV R+GV LPRK + R + +G WHP V TV +AGQ G+H RT N +I K Sbjct: 143 VSGVPSKTPEIFEIRIGGSTIENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQVGFHQRTIHNIRIIK 259
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METAC (50S ribosomal protein L3P OS=Methanosarcina acetivorans GN=rpl3p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + + G+ +K +ME ++ + K +++ + + VF+ ++D +T GKG +G V RWG+ + K R LR+V +GA++P+RVS+ V + GQ GYH RTE NK+I K+G +E Sbjct: 150 KSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |