FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_CALMQ (50S ribosomal protein L3P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16 Identity = 49/125 (39.20%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 G+ +K ++EI V G ++ ++ +A G K++ VF+ +++D+IGVTKGKG +GV+ R+GV LPR K +G R+ +G PA V +T R GQ G+H RTE NK+I K+ E Sbjct: 159 GVGKKTPEVLEIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE 281
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16 Identity = 42/128 (32.81%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + + G+ +K +ME ++ + K ++A + + VF+ ++D +T GKG +G V RWG+ K R LR++ +G+++P+RVS+ V + GQ GYH RTE NK+I K+G +E Sbjct: 150 KSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METS5 (50S ribosomal protein L3P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl3p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 43/117 (36.75%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 362 L +K ++E+Q+ GG+ ++++ + + VF++ +++DIIGVTKG G++GV+ R+GV LPR K +G RKV G V + GQ G+H RTE NK+I K+ Sbjct: 161 LGKKTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGP--SLGTPSYVPQPGQMGFHRRTEYNKRILKI 275
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METBF (50S ribosomal protein L3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl3p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + + G+ +K +ME ++ + K ++A + I VF+ +ID +T GKG +G RWG+ + K R LR++ +G + RVS+ V + GQ GYH RTE NK+I K+G +E Sbjct: 150 KSLTGVPKKTPDIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQGSLRQIGTLGGFGLRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE 277 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |