FC920417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: RO32_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ D LRE+ ++G L DCVVM++ T RSRGFG+VT++ E+ ++SA H + R++E K A +E+ P Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARP 111
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: RO31_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ D LRE+ ++G L DCVVM++ T RSRGFG+VT++ E+ ++SA H + R++E K A +E+ P Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARP 111
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_RAT (Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_PANTR (Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_MOUSE (Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_HUMAN (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA1_BOVIN (Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: RA1L3_HUMAN (Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3 OS=Homo sapiens GN=HNRPA1L3 PE=5 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 32/85 (37.65%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAP 665 +KL + G+ ++ + LR + ++G L DCVVM++ +T RSRGFG+VT+A+ E+ A++A H + R++E K A +E+ + P Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRP 98
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_RAT (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus GN=Hnrnpa2b1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ ++ + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 110
BLAST of FC920417 vs. ExPASy Swiss-Prot
Match: ROA2_PONAB (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii GN=HNRNPA2B1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 414 KKLVVLGIPWDVDTDGLREYMSKFGDLEDCVVMKERSTGRSRGFGYVTFASAEDAKTALSAE-HFLGSRMLEVKIATPKEEMRAPPRKVS 680 +KL + G+ ++ + LR Y ++G L DCVVM++ ++ RSRGFG+VTF+S + A++A H + R++E K A +EE P V+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVT 110 The following BLAST results are available for this feature:
BLAST of FC920417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920417 ID=FC920417; Name=FC920417; organism=Citrus clementina; type=EST; length=680bpback to top |