FC920425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.351e-65 Identity = 120/189 (63.49%), Postives = 139/189 (73.54%), Query Frame = 3 Query: 90 LCFFSVAL---SLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 L FF++A + TA+ P V WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I Sbjct: 10 LVFFAIAAVGCTQLTTADDAAPPV-----WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSI 192
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.351e-65 Identity = 126/192 (65.62%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGP--WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 M L R+L +VA A V AGG W S ATFYGGSDASGTMGGACGYGNLYS GYG +TAALSTALFNNG SCGACFE++CGG C G A+ TATN CPPN+A D GGWCNPPRPHFD+A P F ++AQ RAG+VPV YRRV C K+GGIRFTI G YFNLVLVTNV GAGD+ Sbjct: 1 MELLRLLAVAAVA--------AMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAV--TATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDV 181
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 8.756e-65 Identity = 112/158 (70.89%), Postives = 127/158 (80.38%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG 635 W AHATFYGG+DASGTMGGACGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTG 208
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.494e-64 Identity = 117/188 (62.23%), Postives = 136/188 (72.34%), Query Frame = 3 Query: 84 RMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 RML A+ A A G W AHATFYGG+DASGTMGGACGYGNLY+QGYG TAALSTALFN+GL+CG C++L C D WC PG ++ ITATNFCPPN+ PSD+GGWCNPPRPHFD+A P + K+ YR GI+PV Y+RVPC K+GG+RFTING YF LVL+TNV AG I Sbjct: 6 RMLAAVVCAIMPAAAMAAGGVGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPG-VSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSI 192
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 3.327e-64 Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W AHATFYGG+DASGTMGGACGY +LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + +TATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSI 208
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 9.681e-64 Identity = 115/191 (60.21%), Postives = 143/191 (74.87%), Query Frame = 3 Query: 87 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG----DPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 +L S++ SL +++ A A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+CGG D + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRRV CR++GG+RFTING YFNLVLV+NV GAGD+ Sbjct: 9 LLVLLSLSSSLSSSSAA------AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDV 193
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.157e-63 Identity = 112/160 (70.00%), Postives = 129/160 (80.62%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 GPW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFEL C DPQWC G +I++TATNFCPP GG C+PP HFDL+ P++ K+A Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDV 186
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.070e-62 Identity = 116/193 (60.10%), Postives = 135/193 (69.95%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG-DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 MA RML + +L TA+A W A ATFYGGSDASGTMGGACGYG+LY GYG TAALSTALFN G SCGACF + C QWC PG +I +TATNFCPPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + + Sbjct: 1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQ 184
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 5.312e-62 Identity = 110/184 (59.78%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 99 FSVALSLFATANAKIP---GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 F VAL+ A K+ G F GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC P C G +++TATN CPPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ Sbjct: 16 FLVALAAGDAAPPKVHRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDV 199
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 7.671e-61 Identity = 109/192 (56.77%), Postives = 136/192 (70.83%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 M + R + AL + + + A A G W S ATFYGG DASGTMGGACGYGNLY+QGYGV AALSTALFN G SCG C+ + C P+WC G A+ ITATN CPPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + Sbjct: 1 MMVIRFFAVLAAALCITSASAA------AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSV 185 The following BLAST results are available for this feature:
BLAST of FC920425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920425 ID=FC920425; Name=FC920425; organism=Citrus clementina; type=EST; length=649bpback to top |