FC920425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 343.969 bits (881), Expect = 4.030e-94 Identity = 155/182 (85.16%), Postives = 170/182 (93.41%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 SV ++ A + A+IPGV+ GG W++AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFELKC DP+WC+ G+P+I ITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLK+A+YRAGIVPVS+RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG+IVR Sbjct: 9 SVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVR 190
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 4.030e-94 Identity = 154/177 (87.01%), Postives = 168/177 (94.92%), Query Frame = 3 Query: 117 LFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 LF+ A+A+IPG+++GG WQ+AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNG+SCGACFELKC DPQWC+ G+P+ILITATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+AQYRAGIVPVSYRRVPCRKRGGIRFTING RYFNLVL+TNVAGAGDIVR Sbjct: 14 LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVR 190
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 4.030e-94 Identity = 158/188 (84.04%), Postives = 171/188 (90.96%), Query Frame = 3 Query: 81 FRMLCFFSVALSLFATA-NAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 FR+ + +V S TA NAKIPGV++GGPWQ+AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFE+KC DP+WC PGNP+IL+TATNFCPPNFAQPSD+GGWCNPPR HFDLAMPMFLK+ YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI Sbjct: 6 FRVGLWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDI 193
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 6.434e-92 Identity = 151/188 (80.32%), Postives = 170/188 (90.43%), Query Frame = 3 Query: 84 RMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 +++ F +V + TANAKIPGV+ GGPW +AHATFYG +DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCG+CFELKC DP WC PGNP+ILITATNFCPPNF Q SDNGGWCNPPR HFDLAMPMFL +A+Y+AGIVPVSYRR+PCRK+GGIRFTINGF+YFNLVLVTNVAGAGD+++ Sbjct: 4 KVITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIK 191
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 5.098e-89 Identity = 150/183 (81.97%), Postives = 166/183 (90.71%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 VAL + + A +IPG + GG WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVN AALSTALFN+G SCGACFE+KC P +WC+PG+P+ILITATNFCPPN+A PSDNGGWCNPPRPHFDLAMPMFL +A+YRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVL+TNVAGAGDIVR Sbjct: 16 VALQV-SPAAGRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVR 197
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 1.640e-87 Identity = 146/187 (78.07%), Postives = 165/187 (88.24%), Query Frame = 3 Query: 87 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 +L F + L L T +A IP VF+GG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALST+LFN+G SCGACFE+KC DP+WC+PGNP++ +TATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+A+YRAGIVP+SYRRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R Sbjct: 8 LLTIFPLFLLLSFT-DAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIAR 193
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 7.146e-75 Identity = 131/179 (73.18%), Postives = 147/179 (82.12%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 +AL FA + G AG W +AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE+KC D WC PG AI++TATNFCPPN A P++ GGWCNPP HFDL+ P+F ++AQY+AG+VPVSYRRVPC +RGGIRFTING YFNLVLVTNV GAGD+ Sbjct: 11 IALFCFAAMVCSVHGYDAG--WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPG--AIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDV 185
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.079e-74 Identity = 124/163 (76.07%), Postives = 143/163 (87.73%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 +AGG W +AHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C D +WC PG+ I++TATNFCPPN A P++ GGWCNPP+ HFDL+ P+F ++AQYRAGIVPV+YRRVPC +RGGIRFTING YFNLVL+TNV GAGD+ Sbjct: 22 YAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGS--IVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 182
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 7.901e-74 Identity = 124/161 (77.02%), Postives = 141/161 (87.58%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 GG W +AHATFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFNNGLSCG+CFE++C D +WC PG+ I++TATNFCPPN A ++NGGWCNPP HFDLA P+F ++AQYRAGIVPVSYRRVPCR+RGGIRFTING YFNLVL+TNV GAGD+ Sbjct: 23 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGS--IVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDV 181
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 6.689e-73 Identity = 121/160 (75.62%), Postives = 137/160 (85.62%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 G WQSAHATFYGG DASGTMGGACGYGNLYS GYG NTAALST LFN+G +CG+C+EL+C D QWC PG+ + +TATN CPPN+A P+D+GGWCNPPRPHFD+A P FL++ YRAGIVPVSYRRVPC K+GGIRFTING YFNLVLVTNVAG GD+ Sbjct: 27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGS--VTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDV 184 The following BLAST results are available for this feature:
BLAST of FC920425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920425 ID=FC920425; Name=FC920425; organism=Citrus clementina; type=EST; length=649bpback to top |