FC920425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.310e-57 Identity = 100/161 (62.11%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVR 647 W A ATFYGGSD +GTMGGACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ + C WC PG +I ITATN CPPN+A+ SD GGWCNPPR HFD++ P + +A Y+AGIVPV+++RVPC+K GGIRFTI+G YF LV V NV G+G + + Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQ 182
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.689e-56 Identity = 103/182 (56.59%), Postives = 127/182 (69.78%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 +V +SL A A + F W AHATFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C G C G+PAI +TATN CPPN+A+ D GG WCNPPR HFDL+ P F+++A +RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ Sbjct: 16 AVIISL-AGAATTVDAKFRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDV 195
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.162e-55 Identity = 97/163 (59.51%), Postives = 121/163 (74.23%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP-QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 A W SA ATFYGGSDASGTMGG+CGYGN+YS GYG NT ALS+AL+ +G SCGAC+ + C +WC G ++ +TATN+CPPN+++ D GGWCNPPR HFD++ P + +A Y +GIVPV Y R PCR+ GGIRF I G Y+ LVLVTNVAG+G + Sbjct: 23 AAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAV 184
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDI 211
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNFCP N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDI 205
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 6.954e-54 Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W ATFYG + T GACGYG+L+ QGYG+ TAALSTALFNNG CGAC+E+ C PQWC PG +I ITATNFCPP+F +P+DN WCNPP+ HFDL+ PMFLK+A+Y+AG+VPV +RRVPC K GG++F I G +F ++L NV GAG + Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPG--SIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAV 243
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.023e-53 Identity = 92/158 (58.23%), Postives = 117/158 (74.05%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG ++ ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPG--SVKITATNFCPPDYSK--TEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDI 201
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53 Identity = 93/158 (58.86%), Postives = 116/158 (73.42%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG I ITATNFCPP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPG--TIKITATNFCPPDYSK--TEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDI 208
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53 Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 A W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFN+G SCG C+ + C P WC G AI +T TN+CPPN+ P GGWCN RPHFD++ P + + Y AGI+P+ Y++V C + GG+RFTINGF YF LVLVTN+AG+G I Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLP--YGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSI 179
BLAST of FC920425 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52 Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 641 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFNNG SCG C+ + C D P C G AI +T TNFCPPN+ P GGWCN RPHFD++ P + + Y AGIVP+ Y++V C + GG+RFTI G YF LVLVTN+AG+G I Sbjct: 23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLP--YGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSI 179 The following BLAST results are available for this feature:
BLAST of FC920425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920425 ID=FC920425; Name=FC920425; organism=Citrus clementina; type=EST; length=649bpback to top |