FC920880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 71/200 (35.50%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.326e-30 Identity = 68/196 (34.69%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 79 YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASY 666 +W++S P A +++++ ++ +K + + +FN P LRVGT K ++ VES + KI RQ+ +L + SLS++G + YL +F WD+AKY L+EIV+ I + V+KI+DDLK++ +EY+ + S + + RK SG+L VR L++L+ ++I+ +++ T V+PK S+K++LA Y Sbjct: 7 FWLISAP-NLPGADIFDQVNQKTAKENSLSENKKFNTPALRVGTLNSLITLNDELQKIDTIVESTTKKIARQLVDLVGTKPGKDKSLSINGHTIPQYLQQFAWDDAKYNLKLSLQEIVEKISSAVSKIDDDLKIKSSEYSTLSSSVASEERKASGNLQVRTLNDLITADNIVQTDYFTTAFVVIPKQSEKEFLACY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_MANSE (V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 75/200 (37.50%), Postives = 110/200 (55.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 S YW++S P + W L + ++ Y+F IP+L+VGT K ++FVE V+ K+ + + E LE +L+ + + YLTRF WD AKYP LR I D I V +I+ DLKV+ + YN ++ L + +KQ+GSL R+L++LVK E I+ SE+L TLL +VPK DW A+Y Sbjct: 2 SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLPHYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANY 200
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.392e-28 Identity = 68/200 (34.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + W+++ ++ + + +FNIP L+VGT K ++FVESV KI + + + LE +L +GV + TY+TRF WD AKYP L+ I + + V +I++DLK R + YN+++ L ++ RK GSL R L+++VK ED ++ SE+L TLL +V K + +W +Y Sbjct: 2 TEFWLISAPGDKTCQQTWDKMNMATAESNNLSTNNKFNIPELKVGTLDVLVGLSDELAKLDTFVESVVKKIAQYMTDVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKSISEIMSKQVTQIDNDLKARASAYNSLKGSLQSLERKNVGSLLTRSLADIVKKEDFVLDSEYLTTLLVIVSKTNYPEWQKTY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC2_HUMAN (V-type proton ATPase subunit C 2 OS=Homo sapiens GN=ATP6V1C2 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.902e-26 Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKH--SFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 S +W++S P R+ SK S++T +F IP+ +VGT K ++F ES+ ++ + + E +E G L +GV + +++T F WD AKYP PL +VD I +A+IE DLK R A YN +++ L + +K G+L R LS++V ED ++ SE+LVTLL +VPK + W +Y Sbjct: 2 SEFWLISAPGDKENLQALERMNTVTSKSNLSYNT---KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTY 200
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_CAEEL (V-type proton ATPase subunit C OS=Caenorhabditis elegans GN=vha-11 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.790e-26 Identity = 65/201 (32.34%), Postives = 115/201 (57.21%), Query Frame = 1 Query: 70 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + YW++S+P + A W++L S ++ ++ IP+L+VGT K ++ E+V K+ + E LE + +L + + TY+T+F W+ AKYP L+ + + I +++I++DLKV+ YNN+++ L +++RK GSL +DL++LVK +D ++ SE+L T++ VVPK S K+W Y Sbjct: 6 SGEYWLISVPGEKGANDAWDKLNRSTGNTSTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQTVIVVVPKISVKEWEQKY 203
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_CAEBR (V-type proton ATPase subunit C OS=Caenorhabditis briggsae GN=vha-11 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 64/201 (31.84%), Postives = 113/201 (56.22%), Query Frame = 1 Query: 70 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + YW++S+P + A W++L S ++ ++ IP+L+VGT K ++ E V K+ + E LE + +L + + TY+T+F W+ AKYP L+ + + I + +I++DLK++ YNN+++ L +++RK +GSL +DL++LVK ED ++ SE+L T++ VVPK K+W Y Sbjct: 7 SGEYWLISVPGEKGANDAWDKLNRATGNISTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEGVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQITQIDNDLKMKSLAYNNLKNALASMDRKTTGSLLTKDLADLVKAEDFVLNSEYLQTIIVVVPKILVKEWETKY 204
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC2_RAT (V-type proton ATPase subunit C 2 OS=Rattus norvegicus GN=Atp6v1c2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 66/200 (33.00%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 S +W++S P R+ SK + +F IP+ +VGT K ++F ES+ ++ + + E +E G +L +GV + +++T F WD AKYP PL +VD + +A+IE DLK R A Y+ +++ L + +K +G+L R LS++V ED ++ SE+L+TLL +VPK S W +Y Sbjct: 2 SEFWLISAPGDKENLQALERMNSVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKVHENLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKKSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSYVQWQKTY 200
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC2_MOUSE (V-type proton ATPase subunit C 2 OS=Mus musculus GN=Atp6v1c2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.208e-25 Identity = 65/200 (32.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 S +W++S P R+ SK + +F IP+ +VGT K ++F ES+ ++ + + E +E G +L +GV + +++T F WD AKYP PL +VD + +A+IE DLK R A Y+ +++ L + ++ +G+L R LS++V ED ++ SE+L+TLL +VPK S W +Y Sbjct: 2 SEFWLISAPGDKENLQALERMNNVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKAHETLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKRSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSFAQWQKTY 200
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23 Identity = 65/201 (32.34%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFD-TPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT-SEHLVTLLAVVPKYSQKDWLASY 666 S +WV+S P + + RLQ+ + + Y+F+IP L+VGT K ++F E V K+ + E LE SS+LS + ++ RF W+ AKYPT P++ + + + +V +++ DL+ + YNN++S L + RK +GSL +R+LS +VK +D I SE+L T++ VP +W +Y Sbjct: 2 SEFWVISAPGDKTPQQTYERLQKATMGSGQNLSNCYKFSIPELKVGTLDSLIGLTDDLGKLDTFCEGVCRKVASYMGEVLEDQKDKLSSNLSAGEGTLVNFMHRFQWNMAKYPTKQPIKSLTEILSKVVTQVDTDLRSKSQAYNNLKSSLQNMERKATGSLLLRNLSQIVKKDDFIDGSEYLRTVIVAVPVALFGEWEKNY 202 The following BLAST results are available for this feature:
BLAST of FC920880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920880 ID=FC920880; Name=FC920880; organism=Citrus clementina; type=EST; length=666bpback to top |