FC921302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA2_DAUCA (Proliferating cell nuclear antigen large form OS=Daucus carota PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.359e-99 Identity = 174/198 (87.88%), Postives = 190/198 (95.96%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 MLELRLVQG LLKKVLE+IK+LVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHYRCDRNISMGMNL N++KML+CAGNDDI+T+KADD D +TFMFESPTQDKI+DFEMKLMDIDSEHLGIPE+EY AIVRMPSAEFARICKDL++IGDTVVISVTKEGVKFSTRGDIGTANIV RQNT+VDKPE+AT IE Sbjct: 1 MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHYRCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMDIDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTSVDKPEDATIIE 198 HSP 2 Score: 30.4166 bits (67), Expect = 1.359e-99 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMNS 703 M E VSLTFALRYMNS Sbjct: 199 MQETVSLTFALRYMNS 214
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_SOYBN (Proliferating cell nuclear antigen (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.973e-89 Identity = 156/168 (92.86%), Postives = 166/168 (98.81%), Query Frame = 3 Query: 153 SATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 S+TGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNN++KMLKCAGNDDIIT+KADDGSDTVTFMFESPTQDKI+DFEMKLMDIDSEHLGIPEAEYHAIV+MPS+EFARICKDL+SIGDTVVISVTKEGVKFST+GDIGTANIV RQNT+VDKPEEAT IE Sbjct: 1 SSTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLGIPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTSVDKPEEATVIE 168 HSP 2 Score: 33.8834 bits (76), Expect = 1.973e-89 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMNS 703 M+EPVSLTFALRYMNS Sbjct: 169 MNEPVSLTFALRYMNS 184
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_COTJA (Proliferating cell nuclear antigen OS=Coturnix coturnix japonica GN=PCNA PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.798e-73 Identity = 127/198 (64.14%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LK+VLEA+K+L+ +A +D + G SLQ+MDSSHV+LV L LRSEGF+ YRCDRNI+MG+NLN++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPSAEFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTYRCDRNIAMGVNLNSMSKILKCAGNEDIITLRAEDNADTLALVFETPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNIKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 4.798e-73 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_CHICK (Proliferating cell nuclear antigen OS=Gallus gallus GN=PCNA PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.798e-73 Identity = 127/198 (64.14%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LK+VLEA+K+L+ +A +D + G SLQ+MDSSHV+LV L LRSEGF+ YRCDRNI+MG+NLN++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPSAEFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTYRCDRNIAMGVNLNSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNIKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 4.798e-73 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_MACFA (Proliferating cell nuclear antigen OS=Macaca fascicularis GN=PCNA PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.798e-73 Identity = 126/198 (63.64%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+N+A +D S++G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 4.798e-73 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_HUMAN (Proliferating cell nuclear antigen OS=Homo sapiens GN=PCNA PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.798e-73 Identity = 126/198 (63.64%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+N+A +D S++G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 4.798e-73 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_BOVIN (Proliferating cell nuclear antigen OS=Bos taurus GN=PCNA PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.798e-73 Identity = 126/198 (63.64%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+N+A +D S++G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVAIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 4.798e-73 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_CRIGR (Proliferating cell nuclear antigen OS=Cricetulus griseus GN=PCNA PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 1.064e-72 Identity = 126/198 (63.64%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 1.064e-72 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_RAT (Proliferating cell nuclear antigen OS=Rattus norvegicus GN=Pcna PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.388e-72 Identity = 125/198 (63.13%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RL+QGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD VVIS K+GVKFS G++G NI L Q + VDK EEA IE Sbjct: 1 MFEARLIQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVSIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 1.388e-72 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_MOUSE (Proliferating cell nuclear antigen OS=Mus musculus GN=Pcna PE=1 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 1.810e-72 Identity = 125/204 (61.27%), Postives = 163/204 (79.90%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IECMSQCH 674 M E RL+QGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF+ YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+ +FE+P Q+K++D+EMKLMD+D E LGIPE EY +++MPS EFARIC+DL+ IGD VVIS K GVKFS G++G NI L Q + VDK EEA IE H Sbjct: 1 MFEARLIQGSILKKVLEALKDLINEACWDVSSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVIKMPSGEFARICRDLSHIGDAVVISCAKNGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVH 204 HSP 2 Score: 29.261 bits (64), Expect = 1.810e-72 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVHLTFALRYLN 213 The following BLAST results are available for this feature:
BLAST of FC921302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921302 ID=FC921302; Name=FC921302; organism=Citrus clementina; type=EST; length=703bpback to top |