FC921302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_SARCR (Proliferating cell nuclear antigen OS=Sarcophaga crassipalpis GN=PCNA PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 5.237e-72 Identity = 121/198 (61.11%), Postives = 162/198 (81.82%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RL+ ++LKK+L+AIKEL+++A F+CS +G LQAMD+SHV+L +L LRS+GF+ +RCDRNISMGMNL +++K+LKCA NDD +T+KA D +DTVTFMFESP +K++D+EMKLM++D EHLGIPE +Y +VRMPS EFARIC+DLA ++++I TKEGVKFS GD+G+AN+ L Q ++VDK EEA IE Sbjct: 1 MFEARLINATILKKILDAIKELLHEATFECSESGIQLQAMDNSHVSLGSLTLRSDGFDKFRCDRNISMGMNLGSMAKILKCANNDDTVTVKAQDNADTVTFMFESPNHEKVSDYEMKLMNLDQEHLGIPETDYSCVVRMPSMEFARICRDLAQFSESMLICCTKEGVKFSASGDVGSANVKLAQTSSVDKEEEAVIIE 198 HSP 2 Score: 28.1054 bits (61), Expect = 5.237e-72 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMNS 703 M EPV+LTFA RY+N+ Sbjct: 199 MQEPVTLTFACRYLNA 214
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_XENLA (Proliferating cell nuclear antigen OS=Xenopus laevis GN=pcna PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.162e-71 Identity = 123/198 (62.12%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+++A +D +++G SLQ+MDSSHV+LV L LRS+GF+ YRCDRN S+G+ ++++SK+LKCA +DDIITL+A+D +DTVT +FESP Q+K++D+EMKLMD+D E LGIPE EY +++MPS EFARIC+DL+ IGD VVIS K+GVKFS G++GT N+ L Q + VDK EEA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLIDEACWDITSSGISLQSMDSSHVSLVQLTLRSDGFDTYRCDRNQSIGVKMSSMSKILKCAASDDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNVKLSQTSNVDKEEEAVTIE 198 HSP 2 Score: 29.6462 bits (65), Expect = 1.162e-71 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV LTFALRY+N Sbjct: 199 MNEPVQLTFALRYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_DROME (Proliferating cell nuclear antigen OS=Drosophila melanogaster GN=mus209 PE=1 SV=2) HSP 1 Score: 261.536 bits (667), Expect = 1.515e-71 Identity = 123/198 (62.12%), Postives = 161/198 (81.31%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RL Q ++LKK+L+AIK+L+N+A FDCS +G LQAMD+SHV+LV+L LRS+GF+ +RCDRN+SMGMNL +++K+LKCA N+D +T+KA D +DTVT MFES Q+K++D+EMKLM++D EHLGIPE ++ +VRMP+ EFARIC+DLA ++VVI TKEGVKFS GD+GTANI L Q +VDK EEA IE Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIE 198 HSP 2 Score: 28.1054 bits (61), Expect = 1.515e-71 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMNS 703 M EPV+LTFA RY+N+ Sbjct: 199 MQEPVTLTFACRYLNA 214
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_HAPBU (Proliferating cell nuclear antigen OS=Haplochromis burtoni GN=pcna PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.061e-69 Identity = 122/198 (61.62%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LR +GF+ YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +DT+ +FE+ Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD V+IS K+GVKFS G++GT NI L Q + VDK +EA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNIKLSQTSNVDKEDEAVTIE 198 HSP 2 Score: 25.409 bits (54), Expect = 1.061e-69 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV L FAL Y+N Sbjct: 199 MNEPVQLIFALNYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_DANRE (Proliferating cell nuclear antigen OS=Danio rerio GN=pcna PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 1.061e-69 Identity = 122/198 (61.62%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LRS+GF+ YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +D + +FE+ Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD V+IS K+GVKFS G++GT NI L Q + VDK +EA IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADALALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNIKLSQTSNVDKEDEAVTIE 198 HSP 2 Score: 25.409 bits (54), Expect = 1.061e-69 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV L FAL Y+N Sbjct: 199 MNEPVQLIFALNYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_BOMMO (Proliferating cell nuclear antigen OS=Bombyx mori GN=PCNA PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.061e-69 Identity = 123/198 (62.12%), Postives = 158/198 (79.80%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RL++ S+LKKVLEAIK+L+ A FDC G LQAMD+SHV+LV+L LR++GF+ YRCDRNISMGMNL ++SK+L AG+ D T+KA D +D VTF+FESP Q+K++D+EMKLM++D EHLGIPE EY +RMPS+EFARIC+DL+ G+++VIS TKEGVKFS GDIG+AN+ L Q ++DK EEA IE Sbjct: 1 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILIFAGDKDTATIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKEEEAVVIE 198 HSP 2 Score: 26.1794 bits (56), Expect = 1.061e-69 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M EPV+LTFA +Y+N Sbjct: 199 MEEPVTLTFACQYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_ANGJA (Proliferating cell nuclear antigen OS=Anguilla japonica GN=pcna PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 8.872e-69 Identity = 119/198 (60.10%), Postives = 163/198 (82.32%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEAT*IE 656 M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LRS+GF+ YRCDRN+++G++LN++SKMLKCAGN+DIITL+A+D +DT+ +FE+ Q+K++D+EMKLMD+D E LGIPE EY +V+MPS EFARIC+DL+ IGD V+IS K+GV FS G++GT N+ L Q + VD+ ++A IE Sbjct: 1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLALGVSLNSMSKMLKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVMFSASGELGTGNVKLSQTSNVDEEDDAVTIE 198 HSP 2 Score: 25.409 bits (54), Expect = 8.872e-69 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 656 MHEPVSLTFALRYMN 700 M+EPV L FAL Y+N Sbjct: 199 MNEPVQLIFALNYLN 213
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_STYCL (Proliferating cell nuclear antigen OS=Styela clava GN=PCNA PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 6.165e-64 Identity = 111/193 (57.51%), Postives = 154/193 (79.79%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEE 641 M E RL+QGS LKKV EA+K++V +A++DC+++G SLQAMDSSHV+LV L LR++GFE++RCDRN++MG+N+ +++K++KCAGNDDIITL+A+D +D + +FES DK + +EMKLMD+D E LGIPE +Y V +PS EF RIC+DL+ IG+ VVI+ TK+GV+FS +GD+G I L+QNT D EE Sbjct: 1 MFEARLIQGSNLKKVQEALKDIVTEASWDCTSSGISLQAMDSSHVSLVQLTLRADGFENFRCDRNLAMGINMTSMAKIMKCAGNDDIITLRAEDNADMLELIFESSKGDKYSQYEMKLMDLDCEQLGIPEQDYSCCVTLPSQEFGRICRDLSQIGECVVITCTKDGVQFSAKGDLGAGKIKLKQNTGSDIKEE 193 HSP 2 Score: 25.409 bits (54), Expect = 6.165e-64 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 662 EPVSLTFALRYMN 700 EPV LTFA++Y+N Sbjct: 202 EPVQLTFAIKYLN 214
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_SCHPO (Proliferating cell nuclear antigen OS=Schizosaccharomyces pombe GN=pcn1 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62 Identity = 110/194 (56.70%), Postives = 155/194 (79.90%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEA 644 MLE R Q +LLKK+L+AIKELV DANFDC+ G SLQAMDSSHVALV++L++S+GFE YRCDRNI++G+NLN +SK+L+CA N+D++TLKA+D + + +FES D+I+D+++KLMDID EHLGIP+ EY A + MP+AEF RI +DL ++ D+V I+ +KEGV+FS +GDIG + L+Q+T + +++ Sbjct: 1 MLEARFQQAALLKKLLDAIKELVTDANFDCNDNGISLQAMDSSHVALVSMLIKSDGFEPYRCDRNIALGINLNALSKVLRCAQNEDLVTLKAEDTPEVLNLVFESEKNDRISDYDVKLMDIDQEHLGIPDIEYDATITMPAAEFQRITRDLLTLSDSVTINASKEGVRFSCKGDIGNGSTTLKQHTDLSDQDQS 194
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_DICDI (Proliferating cell nuclear antigen OS=Dictyostelium discoideum GN=pcna PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.597e-61 Identity = 115/200 (57.50%), Postives = 156/200 (78.00%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKA-DDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKP-EEAT*IE 656 M E RL+Q SLLKK+LE+IK+LV ANFDCS G SLQAMD +HV L+ L+LR+EGFE Y CDR++S+G++L ++SK+LKCAGNDD +T++A D+ SDTVTF+FESP D+++DFE+KL+DI +E I +++Y A+++MPSAE RIC+DL+ IG+ V IS KEGVKFS GD G+ NI ++ + D P E+AT IE Sbjct: 1 MFEARLLQASLLKKILESIKDLVESANFDCSPEGISLQAMDGTHVTLINLVLRNEGFETYNCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLIDIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGNITIKPTSDSDVPAEQATVIE 200 HSP 2 Score: 20.4014 bits (41), Expect = 3.597e-61 Identity = 7/14 (50.00%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 662 EPVSLTFALRYMNS 703 EPV L FAL+++++ Sbjct: 203 EPVVLNFALKFLSN 216 The following BLAST results are available for this feature:
BLAST of FC921302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921302 ID=FC921302; Name=FC921302; organism=Citrus clementina; type=EST; length=703bpback to top |