FC921302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METTH (DNA polymerase sliding clamp OS=Methanobacterium thermoautotrophicum GN=pcn PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 53/191 (27.75%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKP 635 M + L ++L+ +AI +V++ SA G L A+D SH+ V L L++E F+ Y CD + ++ + K+LK A +D + L D+G+ + F E+ + F+++L+DI+ E PE EY +P D+ D + V ++ S G+ G A I +DKP Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEYVCDEPERINVDTEELMKVLKRAKANDRVILSTDEGNLIIQFEGEA-----VRTFKIRLIDIEYETPSPPEIEYENEFEVPFQLLKDSIADIDIFSDKITFRVDEDRFIASAEGEFGDAQIEYLHGERIDKP 186
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METVS (DNA polymerase sliding clamp OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcn PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQN 617 KKV+ A LV++ F+ TG AMD SHVALV++ + E FE Y D + +G++L + K++ + D+ + L+ DD + + F+S K F + L D+ S +L +P+ Y V + + F KD + D + + V ++ ++GD+ + V N Sbjct: 12 KKVINATSNLVDEICFEVDETGIKASAMDPSHVALVSMGMPKEVFESYEGDIH-DIGIDLEALKKIIARSKGDEKLILELDDEKNKLNVTFKSNVTRK---FSIALYDVSSSNLKVPDISYPNQVSIKAGAFVEALKDAELVNDHITLKVDEDKFVIYSKGDLNQSETVFENN 180
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METST (DNA polymerase sliding clamp OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pcn PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15 Identity = 49/180 (27.22%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI 602 M +L L S+ K +AI +V++ + + G L A+D SH+ V L L+ F+ Y CD+ I + ++ + K+LK + NDD++ L D G+ +T FE + F++KL+D++ + P+ Y + +P + +D+ + D V V ++ + GD A I Sbjct: 1 MFKLVLSDPSIFKTSFDAISSIVDEVQIEVDSDGLRLNAIDRSHITYVHLELKESLFDIYECDKPIKLNLDTEELMKVLKRSKNDDVMELTVDVGNLILT--FEGAVK---KTFKVKLIDLEYDTPSQPDIPYDIKIPIPVSILKEAIQDIEIVSDRVSFEVDEDKLTLEAVGDFADAKI 175
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METJA (DNA polymerase sliding clamp OS=Methanocaldococcus jannaschii GN=pcn PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15 Identity = 46/175 (26.29%), Postives = 87/175 (49.71%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTT 623 KKV++ I L+++ F+ G AMD SHVALV+L + FE Y D + +G++L K++ A D + L+ D+ + + +FE+ + K F + L+DI + + +PE EY ++ + F KD D V++ ++ +GD+ + ++++ Sbjct: 13 KKVVDTISTLLDEICFEVDEEGIKASAMDPSHVALVSLEIPRLAFEEYEADSH-DIGIDLEAFKKVMNRAKAKDRLILELDEEKNKLNVIFENTGKRK---FSLALLDISASSVKVPEIEYPNVIMIKGDAFKEALKDADLFSDYVILKADEDKFVIHAKGDLNENEAIFEKDSS 183
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METM6 (DNA polymerase sliding clamp OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pcn PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 48/169 (28.40%), Postives = 83/169 (49.11%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIV 605 KKV+ A LV++ F+ G AMD SHVALV++ + E FE Y D + +G++L + K++ D+ + L D + + F+S K F + L D+ S +L +P+ EY V + + F KD + D + + V ++ ++GD+ + V Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKEVFEEYEGDIH-DIGIDLEALKKIIARGKGDEKLILDLDVEKNKLNVTFKSNVTRK---FSIALYDVSSSNLKVPDIEYPNNVSIKAGAFVEALKDAELVNDHITLKVDEDKFIIYSKGDLNQSETV 176
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METS3 (DNA polymerase sliding clamp OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=pcn PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 46/194 (23.71%), Postives = 91/194 (46.91%), Query Frame = 3 Query: 63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEA 644 M + L S+LK +AI +V++ + G L A+D SH+ V L L++ F+ Y CD + ++ +LK A + D + + D+G+ +TF D F+++L+DI+ ++ PE E+ A ++ D+ D + + V ++ + S G+ G A++ ++ E++ Sbjct: 1 MFKAELSDSSILKTSFDAISSIVDEVQIQTDSEGMRLDALDRSHITFVHLELKASLFDEYVCDVPEKINIDTGEFMSVLKRAKSQDRVIMSLDEGNFIITF-----EGDATRTFKIRLIDIEYDNPTPPELEHPASFKVHFGILKDAINDIDIFSDKIALQVDEDYFRASADGEFGDASVKYLHGENINTQEKS 189
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METMP (DNA polymerase sliding clamp OS=Methanococcus maripaludis GN=pcn PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 48/182 (26.37%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEA 644 KKV+ A LV++ F+ G AMD SHVALV++ + + FE Y D +G++L + K++ D+ + L D + + F+S K F + L D+ S +L +P+ EY V + + F KD + D + + + + ++GD+ + V + ++D + A Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDLEALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRK---FSIALYDVSSSNLKVPDIEYPNSVSIKAGAFVEALKDAELVNDHITLKIDENKFVIYSKGDLNQSETVF--DNSIDDDDNA 187
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METM7 (DNA polymerase sliding clamp OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pcn PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIV 605 KKV+ A LV++ F+ G AMD SHVALV++ + + FE Y D +G++L + K++ D+ + L D + + F+S K F + L D+ S +L +P+ EY V + + F KD + D + + + ++ ++GD+ + V Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDLEALKKIIARGRGDEKLILDLDTEKNKLNVTFKSNVTRK---FSIALYDVSSSNLKVPDIEYPNSVSIKAGAFVEALKDAELVNDHITLKIDEDKFIIYSKGDLNQSETV 176
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METM5 (DNA polymerase sliding clamp OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pcn PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIV 605 KKV+ A LV++ F+ G AMD SHVALV++ + + FE Y D + +G++L + K++ D+ + L D + + F+S K F + L D+ S +L +P+ EY V + + F KD + D + + V ++ ++GD+ + V Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDVH-DIGIDLEALKKIIARGKGDEKLILDLDAEKNKLNVTFKSNVTRK---FSIALYDVSSSNLKVPDIEYPNNVSIKAGAFVEALKDAELVNDHITLKVDEDKFIIYSKGDLNQSETV 176
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_THEPD (DNA polymerase sliding clamp OS=Thermofilum pendens (strain Hrk 5) GN=pcn PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 45/164 (27.44%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIG 590 K ++E++ +V++ANF S G L+A+D +A+V L + S FE Y D+ + L+++ K+LK A +DD I+ + G +T + + F+ L+DI + L P+ + +M S F KD + + ++V + E + R D G Sbjct: 13 KYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEYSVDQETKISAVLDDIDKVLKRAKSDDKISFEVSQGRLIITLSGRAERR-----FKFPLIDIAGQELPSPKLNFTVAAKMLSDTFRDALKDASLVSESVKLKAEDESLWLLARSDKG 171 The following BLAST results are available for this feature:
BLAST of FC921302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921302 ID=FC921302; Name=FC921302; organism=Citrus clementina; type=EST; length=703bpback to top |