FC921302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_META3 (DNA polymerase sliding clamp OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcn PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 50/179 (27.93%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 99 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKF--STRGDIGTANIVL-RQNTTV 626 KK++++I LV++ F+ G AMD SHVAL+++ + E F+ Y D + +G++L + K++ A ++ + L+ D + + + ++ K F + L D+ S ++ +PE Y V + + KD + D V + +T++G KF ++GDI T VL R N ++ Sbjct: 12 KKIIDSISNLVDEICFEVDELGIKANAMDPSHVALISVNIPKESFDEYVSDTH-DIGVDLEALKKIMNRAKPNEKLMLELDMEKNKLDIILKNEGTRK---FSISLYDVSSSNVKVPEIGYPNEVMIKAGTIVESLKDAELVNDHVSLKITEDG-KFIIYSKGDINTNETVLDRDNESI 185
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_ARCFU (DNA polymerase sliding clamp OS=Archaeoglobus fulgidus GN=pcn PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 48/174 (27.59%), Postives = 81/174 (46.55%), Query Frame = 3 Query: 78 LVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLG----IPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDI 587 ++ G LLK V AI LV++A G +A+D ++VA+V + + + FE Y D ++G++++ + + K D++ L +D ES + K E K+ ID + IPE E A + M + EF + I D V+ KEG + +GD+ Sbjct: 5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKSISTKDLVELIVED---------ESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEGFRIEAKGDV 169
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA_METTP (DNA polymerase sliding clamp OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=pcn PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 50/192 (26.04%), Postives = 92/192 (47.92%), Query Frame = 3 Query: 78 LVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDS--EHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVD-KPEEA 644 ++ L+ +EA+ LV++ F + G L+A+D ++VA+V+L + + FE Y+ +G++L +S +L A + + L+ + + S + + L+D + + IPE + A V +P AEF R K + D VV+ V + +GDI + +R + +D KP EA Sbjct: 5 VIDAETLRDAIEAVSSLVDEVKFTITEKGLELKAVDPANVAMVSLKIDASAFEFYQATPG-EIGVDLVRLSDLLSMADRGERVRLELLEDERKLRIGVGS------LSYTLSLIDPSAIRKEPRIPELDLPAHVAIPGAEFRRAIKAAEKVSDHVVLGVKDDIFYMEAKGDIDALKLTMRSSELLDMKPGEA 189
BLAST of FC921302 vs. ExPASy Swiss-Prot
Match: PCNA1_PYRAE (DNA polymerase sliding clamp A OS=Pyrobaculum aerophilum GN=pcnA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 43/172 (25.00%), Postives = 82/172 (47.67%), Query Frame = 3 Query: 105 VLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNT 620 ++++I LV +ANF G L+A+D S A+V L + E FE + + G+N + K+L+ D I+++ ++G + + +S + + +++ E L P+ Y A+V+ S A KD ++ D V ++E + S D G + L +N+ Sbjct: 17 IIDSISVLVEEANFLIRNDGLYLRALDVSRTAMVDLAIPKESFEEFPEVEELRFGLNFKELKKLLRRVKKGDKISMEFEEGRVRIKLIGKS-----VRSIVVPSIEVVGEELPTPKVVYTAMVKAASDVLATAVKDADAVADEVKFEASEEALIISASSDKGEVEVKLDKNS 183 The following BLAST results are available for this feature:
BLAST of FC921302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921302 ID=FC921302; Name=FC921302; organism=Citrus clementina; type=EST; length=703bpback to top |