FC923287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERP3 (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvT PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 62/146 (42.47%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E L RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHL-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_CARHZ (Aminomethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 247 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHI 624 ENLK+T L++ H+ G KMVPF GW MP+QY I+E + R + +FDVSHM + + GK F+ L+ DV+ L G T +GG +DD + K + LVVNA +DKDLAHI Sbjct: 2 ENLKRTPLYEEHIKLGAKMVPFGGWEMPVQYT-GILEEHMAVRTDVGMFDVSHMGEIEITGKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANKDKDLAHI 126
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPY (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPP (Aminomethyltransferase OS=Yersinia pestis (strain Pestoides F) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPN (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPG (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPE (Aminomethyltransferase OS=Yersinia pestis GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPB (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERPA (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRD 690 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L G FL L+ DVA L PG T NE+GG IDD ++ + +D+ LVVN+ RDKDLA I H + + + +T+RD Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHF-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPYQVE-------VTVRD 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 56/129 (43.41%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 259 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 645 +TAL+D H+A GGKMV F GW MPI Y I E RQN +FDVSHM + + G +L +L+ DV + PG T N+NGG IDD ++ K +D+ LVVN R+ DL +E H F Sbjct: 4 RTALYDAHLAAGGKMVDFGGWDMPINYGSQIEEHHA-VRQNAGVFDVSHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYK-RDNDYRLVVNCATRETDLGWMEKHAGGF 130 The following BLAST results are available for this feature:
BLAST of FC923287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923287 ID=FC923287; Name=FC923287; organism=Citrus clementina; type=EST; length=719bpback to top |