FC923287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_ARATH (Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GDCST PE=1 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 7.742e-89 Identity = 154/178 (86.52%), Postives = 171/178 (96.07%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGGSLWQLGQSITRRLAQ+DKK ++RR+FAS+A+ LKKTAL+DFHVA+GGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDV+HMCGLSLKGKDCVPFLE LV+ADVAGLAPGTG+LTVFTNE GGAIDDSVITKV D+HIYLVVNAGCRDKDLAHIE HMK+F +KGGDVSWHI Sbjct: 1 MRGGSLWQLGQSITRRLAQSDKKVVSRRYFASEAD-LKKTALYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTVNCRENGSLFDVAHMCGLSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKAFKSKGGDVSWHI 177 HSP 2 Score: 24.6386 bits (52), Expect = 7.742e-89 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 HDERSLLA Q P Sbjct: 178 HDERSLLALQGP 189
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_MESCR (Aminomethyltransferase, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCST PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 4.976e-88 Identity = 152/178 (85.39%), Postives = 168/178 (94.38%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQLGQS+TRRLAQA+KK IARR FAS+A+ LKKTAL+DFHVANGGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDV+HMCGLSLKGKDC+PFLEKLV+ D+AGLAPGTGTL+V TNE GGAIDD+VITKV DDHIYLVVNAGCR+KDLAHIE HMK+F AKGGDVSWHI Sbjct: 1 MRGGGLWQLGQSVTRRLAQAEKKVIARRCFASEAD-LKKTALYDFHVANGGKMVPFAGWSMPIQYKDSIMDSTINCRENGSLFDVAHMCGLSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNAGCREKDLAHIEEHMKAFKAKGGDVSWHI 177 HSP 2 Score: 24.6386 bits (52), Expect = 4.976e-88 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 HDERSLLA Q P Sbjct: 178 HDERSLLALQGP 189
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_FLAPR (Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 8.468e-88 Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQLGQSITRRL Q+DKKTIARR +AS+A+ LKKT L+DFHVANGGKMVPFAGWSMPIQYKDSIMEST+NCR+NGSLFDVSHMCGLSLKGKDCVPFLEKLV+ADVAGL PGTG+LTVFTNE GGAIDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI Sbjct: 1 MRGG-LWQLGQSITRRLGQSDKKTIARRCYASEAD-LKKTVLYDFHVANGGKMVPFAGWSMPIQYKDSIMESTINCRENGSLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHI 176 HSP 2 Score: 22.3274 bits (46), Expect = 8.468e-88 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 +DERSLLA Q P Sbjct: 177 YDERSLLALQGP 188
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_FLATR (Aminomethyltransferase, mitochondrial OS=Flaveria trinervia GN=GDCST PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.880e-87 Identity = 156/178 (87.64%), Postives = 167/178 (93.82%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQ+GQSITRRL Q+DKKTI RR +AS+A+ LKKT L+DFHVANGGKMVPFAGWSMPIQYKDSIMEST+NCR+NGSLFDVSHMCGLSLKGKDCV FLEKLV+ADVAGLAPGTG+LTVFTNE GGAIDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI Sbjct: 1 MRGG-LWQVGQSITRRLGQSDKKTIVRRWYASEAD-LKKTVLYDFHVANGGKMVPFAGWSMPIQYKDSIMESTINCRENGSLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEQHMKAFKAKGGDVSWHI 176 HSP 2 Score: 24.6386 bits (52), Expect = 1.880e-87 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 HDERSLLA Q P Sbjct: 177 HDERSLLALQGP 188
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_SOLTU (Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.880e-87 Identity = 157/178 (88.20%), Postives = 167/178 (93.82%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQLGQSITRRLAQADKKTI RR FASDA+ LKKT L+DFHV NGGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDVSHMCGLSLKGKD +PFLEKLVIADVAGLAPGTG+LTVFTNE GGAIDDSV+TKV +DHIYLVVNAGCRDKDLAHIE HMKSF +KGGDVSWHI Sbjct: 1 MRGG-LWQLGQSITRRLAQADKKTIGRRCFASDAD-LKKTVLYDFHVVNGGKMVPFAGWSMPIQYKDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVTNDHIYLVVNAGCRDKDLAHIEEHMKSFKSKGGDVSWHI 176 HSP 2 Score: 24.6386 bits (52), Expect = 1.880e-87 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 HDERSLLA Q P Sbjct: 177 HDERSLLALQGP 188
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_FLAAN (Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.562e-86 Identity = 155/178 (87.08%), Postives = 167/178 (93.82%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQLGQSITRRL Q+DKKTI RR +AS+A+ LKKT L+DFHVA+GGKMVPFAGWSMPIQYKDSIM+ST+NCR+NGSLFDVSHMCGLSLKGKDCV FLEKLV+ADVAGLAPGTG+LTVFTNE GGAIDDSVITKV DDHIYLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI Sbjct: 1 MRGG-LWQLGQSITRRLGQSDKKTIVRRCYASEAD-LKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTINCRENGSLFDVSHMCGLSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHI 176 HSP 2 Score: 22.3274 bits (46), Expect = 4.562e-86 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 +DERSLLA Q P Sbjct: 177 YDERSLLALQGP 188
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_PEA (Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST PE=1 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 5.962e-83 Identity = 154/179 (86.03%), Postives = 163/179 (91.06%), Query Frame = 1 Query: 145 MRGGSLWQLGQSITRRLAQA-DKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 MRGG LWQLGQSITRRLA DKK +ARR FA+++E LKKT L+DFHVA+GGKMVPFAGWSMPIQYKDSIM+STLNCRQNGSLFDVSHMCGLSLKGKD V FLEKLVIADVA LA GTGTLTVFTNE GGAIDDSVITKV DDH+YLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHI Sbjct: 1 MRGG-LWQLGQSITRRLANGGDKKAVARRCFATESE-LKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTLNCRQNGSLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHI 177 HSP 2 Score: 24.6386 bits (52), Expect = 5.962e-83 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 678 HDERSLLAFQAP 713 HDERSLLA Q P Sbjct: 178 HDERSLLALQGP 189
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_CHICK (Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.173e-39 Identity = 79/158 (50.00%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 208 KKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIT 681 + +ARRH +S E LK+T L H A GG+MVPFAGWS+P+QY +ES L+ R++ SLFDVSHM + G+D V FLE LV+ D+A L PG GTLT+ TNE G +DD ++T +DH+Y+V NAGC DKD A +E A GGDV ++ Sbjct: 7 RAALARRHLSSAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLESHLHTRRHCSLFDVSHMLQTRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNAGCADKDRAVMEGRAAELRAAGGDVHLEVS 164
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.438e-38 Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 1 Query: 217 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHITMRDLFLPFRPLA 717 + R +S + L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFDVSHM + G D V LE +V+ D+A L P GTL++FTNE GG +DD +++ + H+Y+V NAGCRDKDLA ++ +K F +G DV + L P A Sbjct: 21 VQSRPLSSVQDVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFDVSHMLQTKIFGCDRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHLYVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVVENALLALQGPTA 187
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 253 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHI 678 L +T L+DFH+A+GGKMV FAGWS+P+QY+DS + S L+ RQ+ SLFDVSHM + G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGCR+KDL ++ ++ KG DV+ + Sbjct: 27 LHRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVNSHLHTRQHCSLFDVSHMLQTKIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKDLTLMQDKVRELQNKGSDVALEV 168 The following BLAST results are available for this feature:
BLAST of FC923287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923287 ID=FC923287; Name=FC923287; organism=Citrus clementina; type=EST; length=719bpback to top |