FC923287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_STAES (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 250 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 669 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT + S Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTVDVSNTS 142
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_STAEQ (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 250 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 669 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT + S Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTVDVSNTS 142
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_BORPA (Aminomethyltransferase OS=Bordetella parapertussis GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 253 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 669 LK+T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV+ Sbjct: 5 LKRTPLAEEHLAAGARMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGRALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVA 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_BORBR (Aminomethyltransferase OS=Bordetella bronchiseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 253 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 669 LK+T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV+ Sbjct: 5 LKRTPLAEEHLAAGARMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVA 140
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_BACA2 (Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 253 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 633 LK+T L+D + GGK + F GW +P+Q+ SI E R LFDVSHM + + GKD + FL+K++ DVA L PG T +GG +DD +I + + LV+NA +KD+A + H Sbjct: 2 LKRTPLYDVYKEYGGKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCYPDGGTVDDLLIYQKSESCYLLVINASNIEKDIAWLTEH 127
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_YERE8 (Aminomethyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 645 K+T L+D HVA G +MV F GW MP+ Y I E + RQ+ +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ +++D+ LVVN+ R+KDL I H + + Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHI-VRQDAGMFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYFRLVVNSATREKDLNWIIQHAEPY 132
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_PSEHT (Aminomethyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 55/123 (44.72%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 259 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHI 624 KT L+ H+ G KMV F GW MPI Y I E R + +FDVSHM + ++G+ FL+KLV DVA L PG T NE GG IDD +I + LVVN+ R+KDLAH+ Sbjct: 4 KTVLYAKHLEAGAKMVDFHGWEMPINYGSQIEEHNA-VRNDAGMFDVSHMTIVDIQGEQAQAFLQKLVANDVAKLTVPGKALYTPMLNEQGGVIDDLIIYFFSNTSYRLVVNSATREKDLAHL 125
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_PECCP (Aminomethyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 256 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 645 K+T L+ H+A+G KMV F GW MP+ Y + E + R+ G +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ + +D+ LVVN+ R+KDLA IE H F Sbjct: 3 KQTPLYQQHLADGAKMVDFHGWMMPLHYGSQLDEHHIVRREAG-IFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEQHAAPF 132
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 247 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKD 612 + LK+T L++ H+A G KMV F GW MP+QY+ I E R LFDVSHM + + G F+++LV D++ L PG + N GG +DD ++ +++D LVVNA DKD Sbjct: 2 QELKRTPLYNIHLAAGAKMVEFGGWLMPVQYEGIIAEHQA-VRSAAGLFDVSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKD 122
BLAST of FC923287 vs. ExPASy Swiss-Prot
Match: GCST_BACLD (Aminomethyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 56/139 (40.29%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 253 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGAIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 669 LK+T L D + GGK + F GW +P+Q+ SI E R LFDVSHM + + G D +PFL+KL+ DV+ L G T E+GG IDD ++ K + LV+NA DKD+ + H+K GDVS Sbjct: 2 LKRTPLFDLYKEYGGKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEITGTDSLPFLQKLLTNDVSTLKEGGAQYTAMCYEDGGTIDDLLVYKKAANVYMLVINAANIDKDVDWMNKHIK------GDVS 133 The following BLAST results are available for this feature:
BLAST of FC923287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923287 ID=FC923287; Name=FC923287; organism=Citrus clementina; type=EST; length=719bpback to top |