FC923454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_COCIM (Putative DNA helicase INO80 OS=Coccidioides immitis GN=INO80 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 56/138 (40.58%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 115 GQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVIN 528 G HR+L++ Q +D++E L + K Y RLDGS + E R D V F P I +ADT++F + DWNP D QAMDRAHRLGQ K V V+RLI RGT+EE++ K + VI+ Sbjct: 1395 GGHRVLLYFQMTRMIDLMEEYLTYRNYK---YCRLDGSTKLEDRRDTVSDFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIS 1529
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_SCLS1 (Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.702e-20 Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 115 GQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNT 561 G HR+L++ Q +D++E L + K YLRLDGS + E R D V F + P I SADT++F + DWNP D QAMDRAHRLGQ + V V+R+I RGT+EE++ K + V+ NT Sbjct: 1437 GGHRVLLYFQMTRMIDLMEEYLTYRNYK---YLRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRMITRGTIEERIRKRALQKEEVQKVVMTGGAGGGVDFNT 1582
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: DOM_DROME (Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.702e-20 Identity = 61/200 (30.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 1 ISELHKLHHSPKLVALQEIMDECGIGVDGSSSENAVNVGQHRILIFAQHKAFLDIIERDL-FQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAET 597 ISE+ P+L+ +CG + V HR+LIF Q LD++E L + H+ YLRLDGS E+R +++ FN D I ADT++F + DWNP D QA DR HR+GQ + VH++RL+ T+E ++ K +++ I N + + + DLF ++ Sbjct: 1640 ISEMTTKFPDPRLIQY-----DCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHI----YLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQS 1830
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.835e-20 Identity = 63/178 (35.39%), Postives = 85/178 (47.75%), Query Frame = 1 Query: 28 SPKLVALQEIMDECGIGVDGSSSENAVNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNT 561 S KL L E++ E + G HR+L++ Q +D++E L + K Y RLDGS + E R D V F P I +ADT++F + DWNP D QAMDRAHRLGQ + V V+RLI R T+EE++ K + VI+ A NT Sbjct: 1320 SGKLAKLDELLRE-------------LKAGGHRVLLYFQMTRMIDLMEEYLTYRNYK---YCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVDFNT 1481
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SRCAP_HUMAN (Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDL-FQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAEN---ASMKTMNTGQLLDL 579 HR+LIF Q LD++E+ L + H+ YLRLDGS E+R +++ FN+D I ADT+VF + DWNP D QA DR HR+GQ + VH++RLI T+EE ++ K + + I N A K +L D+ Sbjct: 2060 HRVLIFTQMTRMLDVLEQFLTYHGHL----YLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDM 2212
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_YEAST (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae GN=INO80 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 53/151 (35.10%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI--NAENASMKTMNTGQ 567 HR+LI+ Q +D++E L + ++RLDGS + E R D+V + ++P I +ADT++F + DWNP D QAMDRAHRLGQ + V V+RL++RGT+EE++ + K + V+ + ++KT+ G+ Sbjct: 1316 HRVLIYFQMTKMMDLMEEYLTY---RQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEVGE 1463
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_YEAS7 (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain YJM789) GN=INO80 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 53/151 (35.10%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI--NAENASMKTMNTGQ 567 HR+LI+ Q +D++E L + ++RLDGS + E R D+V + ++P I +ADT++F + DWNP D QAMDRAHRLGQ + V V+RL++RGT+EE++ + K + V+ + ++KT+ G+ Sbjct: 1322 HRVLIYFQMTKMMDLMEEYLTY---RQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEVGE 1469
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_SCHPO (Helicase swr1 OS=Schizosaccharomyces pombe GN=swr1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.407e-19 Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLF 582 HR+LIF Q LDI+E+ L ++ YLRLDG+ + E+R + + FN+D I ADT++F + DWNP D QA DR+HR+GQ + VH++RLI T+E ++ K + VI + + +LDLF Sbjct: 1008 HRVLIFTQMTKVLDILEQFL---NIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTEWFRKADVLDLF 1158
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVIN 528 + HR+LI+ Q +D++E L K YLRLDGS + +R D+V + + P + +ADT++F + DWNP D QAMDRAHR+GQ+K V V+R I RGT+EE+++ + K + VI+ Sbjct: 1441 LKANDHRVLIYFQMTRMIDLMEEYLTFRQYK---YLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVIS 1578
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_DEBHA (Putative DNA helicase INO80 OS=Debaryomyces hansenii GN=INO80 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTG 564 HR+LI+ Q +D++E L K Y+RLDGS + + R D+V + + P I +ADT++F + DWNP D QAMDRAHRLGQ + V V+RL+ RGT+EE++ + K + V+ ++A +G Sbjct: 1159 HRVLIYFQMTKMMDLMEEYLTYRQHK---YIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEGKSAIANKEESG 1303 The following BLAST results are available for this feature:
BLAST of FC923454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923454 ID=FC923454; Name=FC923454; organism=Citrus clementina; type=EST; length=635bpback to top |