FC923454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.630e-58 Identity = 112/195 (57.44%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 4 SELHKLHHSPKLVALQEIMDECGIGVDGSSSENAVN--VGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLF 582 S LH + H+PKL AL++++ +CG+G +GS+SE+ V QHRILIF Q K+ LDI+E DL + H+ SVTYLRLDGS+ +R IV FN+DP+ID ADT+VF+EHDWNPMRD QAMDRAHR+GQK+VV+V+RLI RGTLEEK+M LQ+FK++IANTVI+ EN+S+++M T QLLDLF Sbjct: 1605 SSLHDIQHAPKLSALKQLLLDCGLG-NGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLF 1798
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe GN=mot1 PE=1 SV=4) HSP 1 Score: 208.379 bits (529), Expect = 2.540e-53 Identity = 103/199 (51.76%), Postives = 140/199 (70.35%), Query Frame = 1 Query: 4 SELHKLHHSPKLVALQEIMDECGIGVDGSSSENAVN------VGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLF 582 S LH L H+PKL AL +++ +CG+G + S + N ++ V +HR+LIF Q K LD++E+DL Q M VTY+RLDGSVE +R + V FN+DP+ID ADT++F+EHDWNPMRD QAMDRAHR+GQKKVV+V+RLI RG LEEK+M LQRFK+++A+TV+N +NA + ++ T Q+LDLF Sbjct: 1693 SGLHDLKHAPKLTALGQLLRDCGLG-NSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQILDLF 1890
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: MOT1_YEAST (TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae GN=MOT1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.055e-51 Identity = 100/200 (50.00%), Postives = 141/200 (70.50%), Query Frame = 1 Query: 7 ELHKLHHSPKLVALQEIMDECGIG---VDGSSSENAVN-----VGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLF 582 +LH + ++PKL AL+ ++ ECGIG +D +S++ + QHR LIF Q K LD++E DLF+ +M SVTY+RLDGS++ R +V+ FN DP+ID ADT++F+EHDWNPM D QAMDRAHR+GQKKVV+V+R+I +GTLEEK+M LQ+FK++IA+TV+N +N+ + +M+T QLLDLF Sbjct: 1601 DLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLF 1800
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_CRYNE (Putative DNA helicase INO80 OS=Cryptococcus neoformans GN=INO80 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 60/163 (36.81%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAE 594 + G HR+L++ Q +D+IE L K YLRLDGS R D+V ++ ++P I +ADT++F +HDWNP D QAMDRAHR+GQ K V V+RL+ RGT+EE+++ + R K I + V+ ++ S +++ LF E Sbjct: 1465 LKAGGHRVLLYFQMTKMMDLIEEYLIFRQYK---YLRLDGSSPIAERRDMVTSWQTNPDIFVFCLSTRAGGLGINLTAADTVIFYDHDWNPSSDAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMARGKKDIQDVVVGTKSVS-DVAKPSEIVSLFMDDE 1623
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum GN=INO80 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNT 561 + G HR+L++ Q +D++E L + K Y RLDGS + E R D V F SDPTI SADT++F + DWNP D QAMDRAHRLGQ + V V+RLI GT+EE++ K + VI+ NT Sbjct: 1411 LKAGDHRVLLYFQMTRMIDLMEEYLTYRNYK---YCRLDGSTKLEDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVVISGGAGGAVDFNT 1559
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_DROME (Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.151e-21 Identity = 59/158 (37.34%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAE 594 HR+LI++Q +D++E + H K Y+RLDGS + R D+V F + I +ADT++F + DWNP D QAMDRAHRLGQ K V V+RLI +GT+EE+++ R K I VI+ N T+ +++ L E Sbjct: 1173 HRVLIYSQMTKMIDLLEE--YMWHRKH-RYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDE 1327
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_MOUSE (Putative DNA helicase INO80 complex homolog 1 OS=Mus musculus GN=Ino80 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.503e-21 Identity = 58/159 (36.48%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDL-FQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAE 594 HR+LI++Q +D++E + ++ H TY+RLDGS + R D+V F + I +ADT++F + DWNP D QAMDRAHRLGQ K V V+RLI +GT+EE+++ + K I VI+ N T+ +++ L E Sbjct: 1121 HRVLIYSQMTRMIDLLEEYMVYRKH----TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDE 1275
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_HUMAN (Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.503e-21 Identity = 58/159 (36.48%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDL-FQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAE 594 HR+LI++Q +D++E + ++ H TY+RLDGS + R D+V F + I +ADT++F + DWNP D QAMDRAHRLGQ K V V+RLI +GT+EE+++ + K I VI+ N T+ +++ L E Sbjct: 1118 HRVLIYSQMTRMIDLLEEYMVYRKH----TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDE 1272
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_USTMA (Putative DNA helicase INO80 OS=Ustilago maydis GN=INO80 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.348e-21 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAE 534 HR+LI+ Q +D++E L K YLRLDG+ + R D+V + + P + +ADT++F +HDWNP D QAMDRAHRLGQ K V V+RLI +GT++E+++ L R K + + V+ + Sbjct: 1596 HRVLIYFQMTRMIDLMEEYLIYRQYK---YLRLDGASKISDRRDMVTDWQTKPELFIFLLSTRAGGLGINLTAADTVIFYDHDWNPSNDSQAMDRAHRLGQTKQVTVYRLITKGTIDERIVRLARNKKEVQDIVVGTK 1730
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_MAGGR (Putative DNA helicase INO80 OS=Magnaporthe grisea GN=INO80 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI 525 + G HR+L++ Q +D++E L + K Y RLDGS + E R D V F ++P+I SADT++F + DWNP D QAMDRAHRLGQ + V V+RLI RGT+EE++ K + VI Sbjct: 1671 LKAGGHRVLLYFQMTRMIDLMEEYLTYRNWK---YCRLDGSTKFEDRRDTVHDFQTNPSIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1807 The following BLAST results are available for this feature:
BLAST of FC923454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923454 ID=FC923454; Name=FC923454; organism=Citrus clementina; type=EST; length=635bpback to top |